Protein

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Genbank accession
YP_010669661.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MAQWNKNEQAYRVQDTTNFEVVMLADENGNPLNSYGAAANIPIAAGLLDGYSHINKFGYRDTIASSWQTIWDKAADYAYYAAATVTAVADDTGDDNGGTVEVQGLDENYAPVTETLTIGGAASVAQFSRVFRAIMITANTGTTNQDEIRIKNGVNDVAVIIAGAGQTLMSLYTIPAGKTGYLMKLQGSVDANNDALFRLYARPFGGAFNVKGQFGVFAAGFNYDYPVPLRFEEKTDLEVKGLSQNGVGGGAIFDLILVDN
Physico‐chemical
properties
protein length:260 AA
molecular weight: 27831,63600 Da
isoelectric point:4,41630
aromaticity:0,10769
hydropathy:-0,10154

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H9-1
[NCBI] 		2783674 Uroviricota > Caudoviricetes > Pantevenvirales > Scyllavirus > Scyllavirus aitchnine
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010669661.1 [NCBI]
Genbank nucleotide accession
NC_070961 [NCBI]
CDS location
range 142351 -> 143133
strand -
CDS
ATGGCACAGTGGAATAAGAACGAACAAGCATATAGAGTTCAAGACACTACTAACTTTGAAGTTGTGATGCTTGCCGATGAAAACGGTAATCCACTCAACAGTTATGGTGCTGCTGCTAACATTCCTATTGCTGCTGGACTGTTAGATGGATATTCGCATATCAATAAGTTTGGATATAGAGATACCATTGCTAGTTCTTGGCAAACCATCTGGGATAAGGCAGCAGATTATGCATACTATGCTGCCGCTACAGTAACTGCAGTTGCAGATGACACTGGTGATGATAATGGAGGAACCGTAGAGGTTCAGGGTTTAGATGAAAACTATGCCCCAGTAACAGAAACCTTGACTATTGGTGGTGCTGCATCAGTAGCACAATTCTCCAGAGTGTTTCGTGCAATAATGATTACTGCAAATACTGGCACAACTAATCAAGATGAAATTAGAATTAAAAATGGTGTCAATGATGTAGCAGTAATTATTGCTGGTGCTGGTCAAACTTTGATGTCCTTATATACGATCCCTGCTGGCAAAACAGGATATTTGATGAAACTTCAAGGTTCTGTTGATGCTAACAATGATGCTCTGTTTAGATTGTATGCAAGACCTTTTGGCGGAGCATTTAATGTTAAAGGTCAGTTTGGTGTATTTGCTGCTGGGTTTAATTATGACTATCCAGTTCCTTTAAGATTTGAAGAGAAAACTGATTTAGAAGTAAAAGGTCTATCTCAAAATGGTGTAGGTGGTGGAGCAATCTTTGATTTGATACTTGTAGATAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f50690d53cdb2f60db8f56f16dc08e4d890d2c00e509566c928201596a92e663
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6607
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H9-1 from the Yellow Sea, China Jiang,T. 2019-04-04 — GenBank