Protein

View in Explore

Genbank accession

YP_010645285.1 [GenBank]

Protein name

tail fiber protein and host specificity

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,89

Protein sequence

MQIWIHDKSMRKVCALNNDVPGMLPYSNSQWHPYLEYSTSTFDFVIPKIVNGKLHDDLKYINDQMYVSFYYDNSYHVFYVSQLVENDFSFQVTCNNTNLELASEISRPLASVDGPKTLEWYLQTLELLVFAGLEIGINEVSDRTRTLTFESQSGTKLEQLHSLMNQFDAEFIFRTELNRDGTLKKFVIDIYQRPDGNHHGIGKVRGDVVLYYQSGLKGVQVSSDKTQLFNYGYFIGKDGLNLGSVELEEKNELGQIEFYTPKGDPVIYAPLSADNYPSALGGANEIDRWTRRDFQTEYSDVDSLKAYALRTIKQYAYPLMTYTVSVQSSFIENYKDINLGDTVKIIDNNFRGGLALEARVSEMIISFDMPQNNSVVFTNFRKLDNKPSSELQQRIDEIVSKSLPYHVEIRTTNGTVFKNGIGRSTVKPILKQGDKIVDATYRFVIDGTIKYSGMTYDVVASEITQPTTLTISAWVDNKEVASEEITFLNVSDGKQGPKGDRGEQGPKGDRGNDGIAGKDGIGLKTTTITYGLSDSDSTQPTDWTSQPPALVKGKYLWTKTVWTYTDSSSETGYQKTYIAKDGNNGNDGIAGKDGVGIKKTTITYAQGISGTVPPTSGWNSQVPNVPEGNYLWTKTVWDYTDNTSETGYSVSKMGEAGTQGVPGKPGADGKTPYFHTAWAYSADGTDGFTTVYPNLNLLDGTKDFSGFWDREAWGWENDGTYKGLTVKKRRNQWGGINKTFTAPKDGTYTFSAYVKSSGNNADIMRFVNLNNEHSPSLKRYLSSNFDWIRDSFTVTLKAKDTIAARYEIAGSGTESILWTAGHKWEEGSVATLWMPSESEATTADYPSFIGQYTNYTQVDSPNPRDYTWILIRGNDGKQGPQGIPGVKGADGRTQYTHIAYADTISGSGFSQTDVNKAYIGMYQDFNAEDSKNPQDYRWSKWKGSDGRDGIPGKAGADGRTPYVHFAYADSADGQKGFSLTQTGRKRYLGVLTNFFKEDSTNPSDYTWNDTAGSISVGGRNLLVKTNQGITNWDWSMSDGDKSVEEVKVDGIRAVKLIKGSTTANTGWNYISYNGLLRELIQPNTKYVLSFDVKPSVDVDFYATLMQSDYKESLTDTVAMTKALANQWNRVSCVLTSKENLPNSTWQVVYLSGMPTTNGNWVIIKNIKLEEGDIPTQWTPAIEDTQEQIDTKADDVLTQAQLNRLNEMNSIIKAELAAKASLDVLDQWKQAYQDFVNANNANRVQAEKDLADASARVVKLENNLNDMSERWNFIDSYMSASNEGLVVGKTDNSSSMLFSPNGRISMFSAGHEVMYISQGVIHIENGIFSKTIQIGRYREEQDLLNPDRNVIRYLGGA

Physico‐chemical properties

protein length:	1356 AA
molecular weight:	151288,27270 Da
isoelectric point:	5,15560
aromaticity:	0,10988
hydropathy:	-0,55251

Domains

Domains [InterPro]

DC_0002
STR
1–622

DC_0002 IPR008983 DC_0002 DC_1971 G3DSA:2.60.120.260 Coil

IPR010572
ENZ
138–382

IPR010572 G3DSA:1.20.5.320 DC_1328 DC_0002

IPR050149
Unmapped
493–976

IPR050149 IPR008979

IPR008983
RBD
730–805

IPR008983

YP_010645285.1

1 1356

Architecture

STR

STR 1-1356

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0002	STR	DC_0002	1	622	Novel HMM	DC_0002	Central	Low	Positional only	166 proteins / 166 hits
IPR010572	ENZ	DC_0675	138	382	InterPro cluster	Tail spike domain	Central	High	Text match	419 proteins / 419 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	491	540	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
IPR050149	Unmapped	-	493	976	InterPro	Collagen superfamily	-	-	-	-
DC_1328	STR	DC_1328	582	849	Novel HMM	DC_1328	Central	Low	Positional only	136 proteins / 136 hits
IPR008983	RBD	IPR008983	725	823	Merged direct domain	Tumour necrosis factor-like domain superfamily	C-terminal	Low	Positional only	19 proteins / 19 hits
IPR008983	RBD	IPR008983	730	805	Merged direct domain	Tumour necrosis factor-like domain superfamily	C-terminal	Low	Positional only	19 proteins / 19 hits
DC_0002	STR	DC_0002	846	876	Novel HMM	DC_0002	Central	Low	Positional only	166 proteins / 166 hits
DC_1971	STR	DC_1971	877	950	Novel HMM	DC_1971	Central	Low	Positional only	95 proteins / 95 hits
DC_0002	STR	DC_0002	944	1356	Novel HMM	DC_0002	Central	Low	Positional only	166 proteins / 166 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	997	1169	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
IPR008979	STR	IPR008979	1027	1170	Merged direct domain	Galactose-binding-like domain superfamily	Central	Low	Positional only	24 proteins / 24 hits
Coil	Unmapped	-	1242	1269	Coils	Coil	-	-	-	-

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Streptococcus phage CHPC1041 [NCBI]	2365015	No lineage information
Host	Streptococcus thermophilus [NCBI]	1308	cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Genbank protein accession

YP_010645285.1 [NCBI]

Genbank nucleotide accession

NC_070661.1 [NCBI]

CDS location

range 14772 -> 18842
strand +

CDS

ATGCAAATTTGGATACACGATAAAAGTATGCGAAAAGTTTGTGCACTGAATAATGACGTTCCCGGAATGTTACCATACTCTAATAGTCAATGGCATCCATATCTTGAGTATTCAACCAGCACATTCGATTTTGTGATTCCTAAAATCGTAAATGGAAAACTGCACGATGATTTAAAATACATCAATGATCAGATGTATGTGTCATTCTATTATGATAATTCATACCACGTTTTCTATGTCTCTCAACTCGTTGAAAATGATTTTAGTTTTCAAGTGACTTGTAATAATACCAACTTGGAACTTGCATCAGAAATATCGCGTCCGTTAGCCAGTGTTGATGGTCCTAAAACCCTTGAGTGGTATCTTCAAACCCTTGAATTATTGGTATTTGCAGGATTAGAAATTGGTATTAATGAAGTTTCTGATAGAACAAGAACGCTTACTTTTGAATCGCAAAGTGGCACAAAATTAGAACAGCTTCATAGCTTGATGAACCAGTTTGATGCTGAGTTTATTTTCCGTACCGAATTAAACCGAGATGGCACTTTGAAAAAATTTGTCATCGACATTTACCAACGTCCAGATGGAAATCATCATGGGATTGGTAAAGTCCGAGGTGATGTCGTTCTATACTATCAAAGCGGTCTGAAAGGCGTCCAAGTATCTAGTGATAAAACCCAACTCTTTAACTATGGCTATTTTATAGGAAAAGACGGATTAAACCTAGGAAGCGTTGAATTAGAGGAAAAGAACGAGTTAGGACAGATAGAGTTTTATACTCCTAAAGGCGATCCGGTTATTTACGCACCATTATCAGCAGATAACTATCCATCTGCGTTGGGTGGTGCTAACGAAATAGATAGATGGACACGCAGGGACTTTCAAACAGAATACAGTGATGTTGATTCCCTCAAAGCTTATGCCTTGCGTACTATCAAACAGTATGCTTATCCTCTAATGACATATACTGTCAGCGTTCAATCTAGTTTCATTGAAAACTACAAGGATATTAATCTAGGTGACACTGTTAAAATCATCGATAATAATTTTAGAGGTGGTTTAGCCCTTGAAGCTCGAGTTTCTGAAATGATTATCAGCTTTGATATGCCTCAAAATAATTCGGTAGTTTTTACTAATTTCAGAAAGTTGGATAATAAACCGTCTAGCGAATTACAACAACGTATCGATGAGATTGTTTCTAAGTCATTGCCATATCATGTTGAGATAAGGACCACGAATGGAACAGTATTTAAGAACGGCATTGGTCGTTCTACTGTTAAACCAATTTTGAAACAAGGCGATAAAATTGTTGATGCAACTTATCGATTTGTGATTGACGGTACTATTAAATATTCTGGTATGACTTATGATGTGGTAGCGTCAGAAATCACTCAACCAACAACATTGACAATTTCAGCGTGGGTAGATAATAAAGAAGTAGCTTCGGAAGAGATTACTTTCTTAAACGTCTCAGATGGTAAACAAGGGCCTAAGGGAGACCGTGGTGAGCAAGGACCTAAAGGAGATAGAGGTAATGATGGAATTGCAGGTAAGGATGGTATAGGATTAAAAACTACAACCATTACTTACGGTCTGAGTGATTCTGATTCTACTCAACCTACTGACTGGACTTCTCAACCACCAGCTTTAGTTAAAGGAAAATACCTTTGGACTAAGACGGTCTGGACATATACTGACTCATCCAGTGAGACTGGCTACCAAAAGACTTATATTGCTAAAGATGGTAATAATGGTAATGACGGGATAGCTGGTAAGGACGGCGTAGGAATTAAGAAAACCACAATTACTTACGCACAAGGTATATCTGGGACAGTTCCACCAACAAGCGGTTGGAATAGTCAAGTTCCGAATGTACCTGAGGGTAATTACCTATGGACTAAAACAGTCTGGGATTATACTGATAACACTAGCGAAACTGGATATTCAGTTTCTAAAATGGGTGAGGCAGGTACTCAAGGTGTACCAGGAAAACCGGGAGCTGACGGGAAGACTCCTTATTTTCATACGGCGTGGGCTTACAGCGCAGACGGTACTGATGGTTTCACGACTGTTTATCCTAATTTGAATTTGTTGGATGGTACTAAAGATTTTAGCGGGTTTTGGGACAGAGAAGCATGGGGTTGGGAAAATGACGGAACATACAAAGGTTTAACCGTTAAAAAAAGACGTAATCAATGGGGCGGTATAAATAAAACATTCACAGCACCAAAAGACGGAACATATACTTTCTCAGCTTATGTTAAAAGTTCAGGAAATAATGCAGATATAATGAGATTTGTGAACCTTAACAATGAGCACTCACCCTCTTTAAAAAGGTACTTAAGTAGTAACTTTGATTGGATTAGAGACAGTTTTACTGTAACTCTGAAAGCCAAGGATACCATTGCGGCCAGATATGAAATAGCTGGTTCTGGAACAGAATCAATTCTATGGACTGCTGGGCATAAGTGGGAAGAGGGTTCAGTCGCTACTCTTTGGATGCCAAGTGAAAGCGAAGCCACAACTGCTGATTATCCAAGTTTCATCGGACAATATACAAACTATACACAAGTAGATAGTCCTAATCCTCGAGATTACACTTGGATTCTCATTCGAGGTAACGATGGGAAACAAGGGCCCCAAGGAATACCAGGAGTAAAGGGTGCTGACGGAAGAACGCAATATACACATATCGCTTACGCTGACACGATTTCTGGTAGTGGTTTTAGTCAAACAGATGTCAATAAAGCCTATATTGGTATGTACCAAGACTTCAATGCCGAAGATAGCAAAAATCCACAAGACTATCGTTGGTCTAAGTGGAAAGGTAGTGATGGACGAGACGGGATTCCCGGTAAAGCTGGGGCTGACGGACGTACGCCTTATGTACATTTTGCCTATGCCGATAGTGCCGATGGTCAAAAGGGTTTCAGTTTAACCCAGACTGGACGTAAGCGCTATTTAGGTGTGCTTACAAACTTCTTCAAAGAAGACAGTACTAATCCTTCTGACTACACGTGGAACGATACTGCGGGTAGTATATCTGTTGGTGGTCGGAACTTACTTGTAAAAACCAATCAAGGTATTACTAATTGGGATTGGTCAATGTCGGATGGTGACAAGAGCGTTGAAGAAGTAAAGGTTGATGGCATTCGTGCTGTAAAACTAATCAAAGGTTCAACAACAGCAAACACTGGTTGGAATTACATTTCATATAACGGTTTACTGCGTGAGCTCATACAACCGAACACAAAGTACGTTCTTTCGTTTGATGTTAAACCAAGCGTTGATGTGGATTTTTACGCAACGCTAATGCAAAGTGACTACAAAGAATCATTGACTGATACTGTCGCTATGACTAAAGCATTAGCAAATCAGTGGAATAGAGTATCATGCGTGCTGACAAGTAAAGAAAATTTGCCAAATAGTACATGGCAAGTTGTATACTTGTCAGGTATGCCAACAACAAATGGTAATTGGGTAATAATTAAAAATATCAAGCTTGAAGAAGGTGACATACCTACTCAGTGGACACCTGCCATAGAGGACACGCAAGAACAGATAGACACCAAAGCTGACGATGTCCTTACACAAGCACAACTAAACAGGTTGAACGAAATGAACTCTATCATTAAAGCTGAACTTGCTGCTAAAGCCTCACTTGATGTACTTGACCAATGGAAGCAAGCCTATCAAGATTTCGTTAACGCAAACAACGCCAATCGTGTGCAAGCCGAAAAAGATTTAGCTGATGCTAGTGCACGAGTAGTGAAACTAGAGAATAACTTAAACGATATGTCAGAACGTTGGAATTTCATTGATAGCTACATGAGTGCATCGAATGAAGGTCTTGTTGTTGGTAAAACGGATAATTCTAGTTCTATGTTGTTTAGTCCAAACGGGCGCATCTCAATGTTCTCAGCTGGTCATGAGGTAATGTATATCTCGCAAGGTGTGATCCATATTGAAAATGGTATTTTCTCGAAAACTATTCAAATCGGACGGTATCGAGAGGAACAAGATTTATTGAATCCAGACCGTAATGTCATTAGATACTTAGGAGGTGCATAA

Genome Context

Tertiary structure

PDB ID

3bc34291f6c31dcd3997dbbbee8bc684804b0492b90c0a0395f3f486854d7e15

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7251

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus	Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T.	2019-05-29	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature