Protein

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Genbank accession

ARM68388.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence UniProt/TrEMBL

Probability 1,00

Evidence GenBank

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,87

Protein sequence

MNELESLVLKNKKDTYGEILTDFDFGSFKYEYEKNNERSVAFTIFKTTSNSDIFDAMLNEMLILWKGQEYVIKSTSVKHDGAIVSNDVTAKHIFMEFQNHYIQKDLENEEMNSEETTDEESKPTMTLEQYLDFGFKGNKLGFTYEIKGTFNKRVEIDELGNKNGMEFLTEGAELFNYIYFADNKKIYIYDEATFYKMADIPLIYKYNSSEVQATITTTDVKTYIQGYGKKKTKAETKNYKPMKPKDLSYSGTFIKDGTWRTETVGASYNKTFNCKWGNETLEWTLKKMAKGGLLDIYLDNELVGRYECYSKTATSEKIVVARNLSKGNHTFKAVYRGAKPGIDYKKSKPCMYVGTEKSTVLNITAVLKGADIYHAYAEYKSPNIDAFGFSEAPTVFDDNALDKEELLKKIKDELNDQPTVEVSTNYLGSVENKHYLNNDDIKENNTIRFIHQPLGYNLDLKVVKITASHPLVNEPVEVDFSNSPTDIIKIQQGISKNIKKVNNLVRGGSLGRASFTIPENYSDIVGVTLTDG

Physico‐chemical properties

protein length:	532 AA
molecular weight:	60606,62940 Da
isoelectric point:	5,55655
aromaticity:	0,11466
hydropathy:	-0,58026

Domains

Domains [InterPro]

G3DSA:6.20.110.10
ATT
3–90

G3DSA:6.20.110.10 G3DSA:3.55.50.40 DC_1309 DC_0937

IPR044051
ENZ
7–92

IPR044051 IPR010572

G3DSA:2.60.120.260
STR
228–360

G3DSA:2.60.120.260

ARM68388.1

1 532

Architecture

ATT

STR

ENZ

RBD

ATT 3-90 | STR 91-375 | ENZ 376-493 | RBD 495-532

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:6.20.110.10	ATT	G3DSA:6.20.110.10	3	90	Merged direct domain	G3DSA:6.20.110.10	N-terminal	Low	Positional only	47 proteins / 47 hits
IPR044051	ENZ	DC_0346	7	92	InterPro cluster	Prophage endopeptidase tail, N-terminal	N-terminal	High	Text match	59 proteins / 59 hits
G3DSA:3.55.50.40	STR	G3DSA:3.55.50.40	92	195	Merged direct domain	G3DSA:3.55.50.40	Central	Low	Positional only	63 proteins / 63 hits
IPR010572	ENZ	DC_0675	112	493	InterPro cluster	Tail spike domain	Central	High	Text match	419 proteins / 419 hits
DC_1309	STR	DC_1309	196	375	Novel HMM	DC_1309	Central	Low	Positional only	61 proteins / 61 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	228	360	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
DC_0937	RBD	DC_0937	495	532	Novel HMM	DC_0937	C-terminal	Low	Positional only	11 proteins / 11 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

ARM68388.1

1 532

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	234	234	0,6861
Central domain	235	521	288	0,3846
C-terminal	522	532	10	0,0276

Note: Constraints were applied during segmentation.
Fixed 11 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-234

Central
235-521

C-terminal
522-532

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Staphylococcus virus IME1354_01 [NCBI]	3070820	Uroviricota > Caudoviricetes > Zhangqianvirus >
Host	Staphylococcus sp. [NCBI]	29387	cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

No CDS data available.

Genome Context

Tertiary structure

PDB ID

05c29eb4463799be5bd839fa22d947a8c815b0781d2db49147ce464f635261ff

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,8949

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence