Protein

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Genbank accession
YP_010662906.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MPIWTKVAGTWKKVLDPEVKKNGAWTPVKVVSVKVGGVWQQVFAIEIVAFIAANTTNAVVKNLFTTDVWTNPLIKKRVVINPGVIVGSTNPAVAALRTDVGWAGTLQLDNYGEIQGAGGAPNSGAGGHAILCQAAGMIIKNIGAIRGGGGAGGVGGTGGAGAYNYTATEGPFASSSYVWSQNTNSIDPNVDFIRWAGGTVYSGNWSDTSPPTSVVVGAYTYYRGSLQNTNLATKTYAVSRTHVATASTSGGAGGNGGRGQGYGQTNAGGSSGSAGGTNAGSGGTGGTGGNSGSAGNTGNSGGSGNAGGGSAGAAGGAAGKAISGSNTLINTGVINGATS
Physico‐chemical
properties
protein length:339 AA
molecular weight: 33037,97670 Da
isoelectric point:9,65448
aromaticity:0,07080
hydropathy:-0,07316

Domains

Domains [InterPro]
DC_1762
ATT
1–160
DC_1762 DC_0422
IPR007932
RBD
47–177
IPR007932
YP_010662906.1
1 339
Architecture
ATT
RBD
RBD
ATT 1-160 | RBD 161-177 | RBD 186-339
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RL2RES
[NCBI] 		103371 Uroviricota > Caudoviricetes > Pootjesviridae > Innesvirus RL2RES >
Host Rhizobium leguminosarum
[NCBI] 		384 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010662906.1 [NCBI]
Genbank nucleotide accession
NC_070889.1 [NCBI]
CDS location
range 127810 -> 128829
strand -
CDS
ATGCCAATTTGGACAAAAGTAGCTGGAACTTGGAAGAAAGTTCTCGATCCTGAAGTCAAGAAGAATGGAGCTTGGACTCCAGTCAAGGTCGTTTCGGTCAAGGTAGGAGGTGTCTGGCAACAGGTCTTCGCTATCGAAATCGTAGCCTTCATCGCAGCAAACACCACGAACGCGGTCGTGAAGAACCTCTTCACGACTGATGTCTGGACGAACCCTCTCATCAAGAAGAGAGTGGTGATCAATCCTGGTGTGATCGTTGGTAGCACGAACCCAGCTGTTGCAGCTCTTCGCACAGACGTAGGTTGGGCAGGCACACTGCAACTCGATAACTACGGCGAAATTCAGGGCGCTGGCGGTGCTCCTAACTCTGGCGCAGGTGGTCACGCTATTCTCTGTCAAGCTGCTGGAATGATCATCAAGAACATTGGTGCTATTCGCGGCGGTGGAGGCGCTGGTGGTGTCGGTGGAACAGGCGGCGCTGGAGCTTACAACTACACAGCTACTGAAGGTCCGTTCGCCAGCAGCAGCTACGTATGGTCACAGAATACGAACTCGATCGATCCTAACGTTGACTTTATCAGGTGGGCAGGCGGAACTGTCTACTCTGGCAACTGGTCTGATACCTCTCCTCCTACCTCTGTAGTCGTCGGTGCGTACACCTACTATCGCGGTTCGCTTCAAAACACCAATCTCGCTACAAAGACCTACGCTGTAAGTCGAACTCACGTTGCTACTGCTTCGACGTCCGGTGGCGCTGGTGGTAACGGTGGACGAGGCCAAGGTTACGGTCAGACGAACGCAGGCGGTTCTTCCGGTTCCGCTGGTGGAACTAACGCTGGTTCTGGTGGCACAGGCGGCACAGGAGGCAACTCTGGTTCTGCTGGCAACACTGGCAACTCTGGTGGATCAGGCAATGCTGGTGGAGGTTCTGCTGGAGCAGCTGGTGGAGCAGCCGGTAAGGCAATCTCTGGATCGAACACCCTTATCAATACGGGTGTGATCAACGGAGCGACTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
814f0c8e59aab7d21d03b0f303382fb312d9bd4c0f0734380ad8d20dbd98f4c6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7873
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage vB_RLeM_RL2RES Gunathilake,D., Bhat,S., Yost,C.K. and Hynes,M.F. 2022-09-15 — GenBank