Protein

Genbank accession
CAB4132187.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MQIEKALVKTLEPIVDELISLKGKIESIELTPGPKGEDGQTPDVEVVAKHIAENYRDVLKGEKGADGLNGADGRDGKDAEAVEVDIEEVAQVLKSDTEFLTEVKGEKGDAGEQGLEGAGINTPIWEDGKVYRSGELVMHNFGQIFKSKADTVKEPGASEDWERVGTFGFRWTGIKEENKSYEVGDIYIDAGSSFLMLPDGRAKMLAQRGKTVVGPQGPDGQRGDRGADGIGIKLIEVQDTKVYIELTDGHSQTLDISEAINKGIVQGATELQNILSASIIDKMFTSVNTDATAIRFFRGPWRSENSYSVGDVVAFNNAVYVCKEVPKDKMAPTGNMVDFSAGAKYWRVVFLLGGGNVAEGGSSTPGATGPQGETGPAGPQGPAGPKGDTGAAGPAGPAGPAGPKGDTGPAGADLTSGAYLPLAGGSMSGPITFPAVGTVMNFASTYGLFTASGGVSFRFGATDIMAFSSTFVTSYKPIVTPATGVGIQFGTGGAYIGRGVNANEMIVSAGGATRATFSSTAFTYAVPLVLAADPVNPLEAATKKYVDALIARIEALEAKVP
Physico‐chemical
properties
protein length:561 AA
molecular weight: 58265,68720 Da
isoelectric point:4,75745
aromaticity:0,07308
hydropathy:-0,18093

Domains

Domains [InterPro]
IPR050149
32–412
IPR050149
IPR008160
364–412
IPR008160
CAB4132187.1
1 561
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4132187.1 [NCBI]
Genbank nucleotide accession
LR796259 [NCBI]
CDS location
range 259 -> 1944
strand -
CDS
ATGCAGATCGAAAAAGCACTAGTCAAGACACTCGAGCCGATTGTTGACGAACTCATCTCCCTCAAAGGGAAGATTGAATCTATTGAACTTACTCCTGGTCCAAAGGGCGAGGACGGACAGACTCCTGATGTAGAAGTGGTTGCTAAGCATATTGCCGAGAACTACCGAGATGTCCTCAAAGGTGAAAAAGGAGCCGATGGCTTAAACGGAGCAGACGGGCGCGACGGCAAGGATGCCGAGGCAGTAGAAGTAGACATTGAAGAAGTTGCGCAGGTCTTGAAGTCCGATACCGAGTTCCTCACAGAAGTTAAGGGTGAGAAGGGCGATGCCGGAGAGCAGGGATTAGAAGGTGCTGGTATCAACACTCCTATCTGGGAAGATGGCAAGGTCTATCGCTCTGGCGAACTCGTCATGCATAACTTCGGTCAGATATTCAAATCCAAGGCTGACACAGTCAAGGAGCCAGGAGCATCTGAGGACTGGGAGCGTGTAGGCACATTCGGCTTCCGCTGGACAGGTATCAAGGAAGAGAACAAATCTTACGAGGTTGGTGATATTTACATTGACGCAGGTAGCTCATTCTTAATGCTACCCGACGGTAGAGCTAAGATGCTCGCCCAGCGCGGTAAGACTGTTGTCGGACCACAAGGACCAGATGGTCAACGCGGTGATCGCGGTGCTGATGGTATTGGTATCAAGCTAATCGAAGTGCAAGACACTAAGGTTTACATCGAGCTAACAGATGGTCATAGCCAGACGCTAGACATCTCTGAAGCGATTAATAAGGGTATCGTTCAAGGTGCGACTGAGCTACAGAACATTCTTTCTGCTTCTATTATTGATAAGATGTTTACCTCTGTCAATACAGACGCAACTGCAATTCGATTCTTCCGTGGTCCATGGCGCTCTGAGAACTCTTATTCTGTAGGTGATGTCGTTGCTTTCAACAATGCTGTGTATGTTTGTAAAGAGGTTCCCAAGGACAAGATGGCTCCTACGGGTAACATGGTTGACTTCTCTGCAGGTGCTAAGTACTGGCGCGTAGTGTTCCTACTCGGTGGTGGTAATGTTGCAGAAGGTGGATCATCTACTCCTGGAGCAACAGGACCACAGGGTGAGACAGGACCAGCAGGACCACAAGGACCTGCAGGACCTAAAGGTGATACTGGCGCAGCAGGACCTGCAGGACCTGCAGGACCTGCAGGACCGAAAGGCGATACAGGACCAGCAGGTGCTGATTTAACTTCCGGAGCCTATCTACCATTAGCTGGTGGATCGATGTCTGGTCCAATTACATTCCCAGCTGTGGGTACTGTGATGAACTTCGCAAGTACCTACGGGTTGTTCACAGCCTCTGGCGGTGTATCATTCCGCTTTGGTGCTACGGACATCATGGCGTTCTCATCTACATTCGTTACATCGTACAAGCCGATTGTCACTCCAGCCACTGGTGTTGGTATTCAGTTCGGTACAGGTGGCGCGTATATCGGTCGTGGAGTTAATGCTAATGAAATGATCGTTAGTGCTGGAGGCGCAACTAGAGCTACATTCTCTTCAACAGCCTTCACCTATGCTGTTCCGCTGGTATTGGCGGCAGACCCAGTTAATCCTTTAGAAGCAGCTACTAAGAAGTATGTAGATGCTCTTATTGCTCGTATTGAAGCCTTAGAAGCGAAGGTTCCATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2557816a8c1420b946ea7f19b9e2bafd3b3e710062c8c743281cf3973897ba41
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6914
Evidence 0,6914
Download PDB

Literature

No literature entries available.