Protein

View in Explore
Genbank accession
XYR95558.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,73
Protein sequence
MPLSRLDNFLKNVKGNILYVDPNNLDATDGVENQGNSLARPFKTIQRALVEASRFSYQKGKDNDRFEKTTIYLSPGVHHIDNRPGWIPTGGNTFLQRNGITSSDFTAFSNTSNFDIFDTNNILYKLNSIHGGVIMPRGVSVVGQDLRKCVIRPIYVPNPENNAIEPSAILRVTGGCYLNSCTIKDADPQKPAYKDYTTNKFKPTFSHHKLTVFEYADGNNKVNINDDFISYSTDRTDLDMYYEKIGIVYGPASGREIEPDYPSANVDIEPRIDEYRIVGPVSGEVGINSIKAGDGVTPTSVIDVKLSNAIIGLNVDTNVIINDVTDKRYNGTYLVTEITSTNEIGVTGFKYEVPVAPGDALPNPTGTSVVLSTDTVTSASPYIFNVSLRSIFGMCGMHADGSKATGFKSMVAAQYTGVGLQVDDNAFVKYNQNSGSFDDSTTIPNLHTDIDAVYKPEYSNYHIKVSNNGFMQLVSIFAIGYSNQFLAESGGDFSVTNSNSNFGQIALTSRGYKNNVFSQDDVGYITQIIPPKALKPEIATVEFSSIDVTKTTSVGDTSRLYLYNFTNPDEAPNTTIQGYRFGSKKTENINVVIPVSGTPEVFRARVVMDNTAYATKKATGSKMARVGRNVSTGNSITNSTFTFTEDHQFIQGESIRVISNDGRLPDGLESNKVYFSIVDGLGGNQLQLAQSFNDSLSGNKISINNLGDTLIVESRVGDKDAGDVGHPVQYDTTERQWYVNVSSASTENNLYAKVVGGGLGDATPRSYITRLKDTRQSADRIHKVRFVIPSSTGSDSARPPLDGYVIQQSSDVTSTSNTEIALNFNPGSVTMSNDAQMRNFSFIANVDYRSGLAFYTTEKPHGLSIGSTVEINNVTSTLFPTVGVGNSGFNGTYEVTGISSARTFSVNQIRSSPGTFTNNTSQRTTALPTVKRKKFSKDFYVYNVETINDYKNGEQDGIYYLSVLNADVKPSVAPFNVEEYAFSQPVGNLYPQLDRDNPKSTATSAACYAIPSNIGETVINNPTNSITGETLEELFSDSGVGAGITDIVSNNVGTAYTIFTDTDHGCNRITRAVIDNPGAGYGDGSSTIQYYYNATLENLGAGSLGRNATALVTVDGTSTGEIIDIAVMDGGTAFVEGDTFRVVGIATTTGFSAATGSVNKIYDNRNDTIRIAGINDYDGRAYNSLYRVTSIPGIKEIEVEPLAPVSPGITTVGLGNNICAPAAFSVIGPAYDTSNFVYNKDVGLATVTTDYANNFRVNNSVVISGAAQTFYNGSFVCVDKIGLTTVVLQVGVNTVTPATGGTIRLHSGGIRNNFGDLVVGNGRLHGRETPIYAGITTTLSAAITSKTTDTINVSNMTDFGFLIGDYIQVNDEIMRIKTTVSRTSGVTQLKVFRGVYGSIADTHVSGSVVQRILFYPIEFRRNSLIRASAHTFEYLGYGPGNYSTAFPDKQTKQLTLDQQITAQSQSTSGGVVNYTGMNDRGDFFIGNKRIASNTGREQVYDTPVQTICGEDPYTVGSTNDVSDFNFVDSSVVKIERNVVVDGGDKSNILSEFNGPVQFTKKVVSTSSEGIEANNIFIQGNAQVSRKITVGIATPSDAGNPGDIVYNANPASGGTVGWVYTTNNEWKTFGTISS
Physico‐chemical
properties
protein length:1633 AA
molecular weight: 176160,18250 Da
isoelectric point:5,15066
aromaticity:0,09186
hydropathy:-0,27642

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYR95558.1
1 1633
Domain Start End Length (AA) Confidence
N-terminal 1 77 77 0,8532
Central domain 78 310 234 0,9375
C-terminal 311 1633 1322 0,1669
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-77
Central
78-310
C-terminal
311-1633

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage RN05-S
[NCBI] 		3412547 Viruses >
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR95558.1 [NCBI]
Genbank nucleotide accession
PV261924.1 [NCBI]
CDS location
range 44792 -> 49693
strand -
CDS
ATGCCATTATCTCGCTTAGATAATTTTCTGAAGAACGTTAAGGGAAATATTCTGTATGTTGATCCAAACAATTTGGATGCAACTGATGGGGTAGAGAACCAAGGTAATTCTCTTGCACGTCCATTCAAAACCATTCAAAGAGCTCTGGTAGAGGCATCAAGGTTCTCCTATCAGAAAGGTAAAGATAATGATAGGTTTGAAAAGACTACAATTTATTTGTCACCAGGTGTCCACCACATTGATAATAGACCTGGTTGGATTCCGACTGGAGGAAATACGTTTCTACAGAGGAATGGTATAACTTCTTCTGATTTTACTGCTTTTAGTAACACATCAAACTTCGATATCTTTGATACCAACAATATTCTCTATAAACTGAATAGTATCCATGGTGGTGTTATTATGCCTCGTGGTGTATCTGTTGTTGGACAGGATCTTAGAAAATGTGTGATTCGTCCGATTTATGTTCCAAACCCTGAAAATAATGCAATTGAACCCTCAGCAATCTTAAGAGTAACTGGTGGTTGTTATCTGAACAGTTGTACTATCAAAGATGCTGATCCACAAAAACCAGCATATAAAGATTATACGACAAACAAATTCAAACCAACATTTTCACACCACAAACTGACTGTTTTTGAATATGCGGACGGTAATAATAAAGTCAATATCAATGACGACTTTATTTCATATTCAACAGACCGTACTGATTTGGATATGTATTATGAGAAGATTGGTATTGTATATGGTCCAGCAAGTGGAAGAGAGATTGAACCTGATTATCCAAGTGCGAATGTAGATATTGAACCAAGAATTGATGAATATAGAATTGTTGGACCTGTCTCTGGTGAAGTAGGTATCAACAGTATCAAGGCAGGTGATGGTGTCACACCAACTTCTGTCATTGATGTTAAATTGTCAAATGCGATCATTGGTCTTAATGTTGATACTAACGTTATCATTAATGATGTAACCGATAAGAGATATAACGGTACTTATCTTGTCACAGAAATCACCTCTACTAATGAAATTGGTGTTACAGGATTTAAGTATGAAGTTCCTGTAGCTCCAGGTGACGCACTTCCTAACCCAACTGGTACAAGTGTAGTTCTTTCTACTGATACTGTTACTTCTGCATCTCCCTATATCTTCAATGTGTCATTGAGATCTATTTTTGGTATGTGTGGTATGCATGCCGATGGTAGTAAGGCAACGGGTTTCAAATCCATGGTTGCTGCACAATATACTGGTGTAGGTCTTCAAGTTGATGACAACGCATTTGTCAAGTATAATCAAAATAGTGGCTCGTTTGATGATTCAACCACTATTCCTAATTTACACACTGACATTGATGCTGTATATAAACCAGAGTATTCAAACTATCACATTAAGGTATCCAATAATGGATTCATGCAATTGGTATCCATTTTCGCAATTGGATATTCAAATCAATTCTTAGCTGAGTCTGGTGGTGATTTTTCTGTCACAAACTCAAACTCCAACTTTGGTCAGATTGCTCTGACTTCAAGAGGATATAAGAATAATGTATTCTCACAGGATGATGTTGGTTACATTACTCAAATTATCCCACCAAAGGCACTTAAGCCAGAAATTGCAACAGTAGAGTTCTCATCTATCGATGTAACAAAGACAACATCTGTTGGAGATACTTCAAGACTTTATCTTTATAACTTCACCAATCCTGATGAGGCACCTAATACGACAATTCAGGGTTATAGATTTGGTTCAAAGAAAACAGAAAATATTAATGTTGTCATTCCTGTAAGTGGTACACCTGAAGTATTCAGAGCAAGAGTTGTCATGGACAACACTGCATATGCTACCAAGAAGGCAACAGGATCAAAAATGGCCAGGGTTGGTAGAAATGTATCAACTGGTAATAGTATCACAAACTCTACATTTACCTTTACAGAAGACCACCAGTTCATTCAAGGTGAATCGATTAGAGTCATTTCAAATGACGGTAGACTTCCTGATGGTTTAGAGAGTAATAAAGTATACTTCTCTATCGTTGATGGTCTGGGTGGTAATCAATTACAACTTGCACAATCATTTAACGACTCACTGTCAGGAAACAAGATTTCTATCAACAATCTTGGTGATACTCTGATTGTAGAGAGTAGAGTTGGTGATAAGGATGCTGGTGATGTAGGTCACCCAGTTCAATATGATACGACAGAACGTCAATGGTATGTTAATGTCTCATCTGCTTCTACTGAAAATAATCTGTACGCAAAAGTTGTTGGTGGTGGATTAGGTGATGCAACCCCAAGGTCTTACATCACAAGACTGAAAGATACCAGACAATCTGCAGATAGAATTCATAAAGTAAGATTCGTCATTCCATCATCTACAGGTTCTGATTCAGCAAGACCACCTCTGGATGGTTATGTGATTCAACAGTCTAGCGATGTAACTAGTACATCAAATACAGAGATTGCACTTAATTTCAACCCTGGTTCTGTTACGATGAGCAATGATGCTCAAATGAGAAACTTTAGTTTTATTGCTAATGTTGATTACAGGTCAGGACTTGCATTCTATACCACTGAAAAACCACATGGTCTTTCTATTGGTTCAACCGTTGAGATTAATAATGTTACAAGTACACTCTTCCCAACTGTAGGTGTTGGTAATTCTGGTTTCAACGGTACATACGAGGTCACTGGTATCAGTAGTGCAAGAACATTCTCGGTAAATCAGATTCGATCAAGTCCTGGTACCTTTACTAACAATACTTCACAGAGAACCACTGCACTTCCAACAGTCAAGAGAAAGAAATTCTCTAAGGACTTTTACGTTTATAATGTAGAAACTATTAATGACTATAAGAATGGAGAGCAAGATGGTATCTATTACCTGAGTGTTCTTAATGCTGATGTAAAACCATCTGTTGCACCATTCAATGTTGAAGAATATGCATTCTCACAACCTGTCGGAAATCTTTATCCACAGTTAGATAGAGACAATCCAAAATCAACTGCAACATCTGCAGCATGTTATGCTATTCCAAGTAATATCGGTGAGACGGTTATTAATAATCCCACCAATAGTATCACTGGAGAGACTTTAGAAGAACTCTTTAGTGATAGTGGAGTTGGTGCTGGTATTACAGATATTGTATCAAATAACGTTGGTACTGCATATACAATCTTTACTGATACTGACCATGGTTGTAACAGAATTACCAGAGCAGTTATTGATAACCCAGGGGCTGGATATGGTGATGGTTCATCAACCATTCAATACTATTATAATGCAACACTTGAAAACCTTGGTGCTGGTTCACTTGGTAGAAATGCAACAGCATTGGTTACTGTAGATGGAACATCGACAGGTGAAATTATTGACATTGCTGTCATGGATGGTGGTACTGCATTCGTCGAGGGTGATACTTTCAGAGTTGTTGGTATTGCAACAACCACTGGATTTAGTGCAGCAACAGGTTCTGTCAACAAGATTTATGATAACAGAAACGACACCATTAGAATTGCTGGTATCAATGATTATGATGGAAGAGCATACAATTCACTTTATAGAGTGACTTCAATTCCTGGAATTAAAGAGATTGAAGTAGAACCATTGGCACCAGTATCACCAGGTATCACAACAGTTGGTCTTGGAAACAATATATGTGCCCCAGCTGCATTCTCTGTCATCGGTCCTGCATATGATACGAGCAATTTTGTTTATAATAAGGATGTTGGACTTGCAACAGTAACTACAGACTATGCAAACAACTTTAGAGTTAATAACAGTGTAGTCATCAGTGGTGCTGCGCAGACATTCTACAATGGTTCATTTGTTTGTGTTGATAAGATTGGTCTGACAACTGTTGTTCTTCAAGTTGGTGTCAATACCGTCACTCCTGCGACTGGTGGAACTATCAGACTTCACAGTGGTGGTATTAGAAATAACTTTGGTGATTTGGTAGTTGGTAATGGTAGACTTCATGGTAGAGAGACACCAATTTATGCTGGTATCACAACTACATTGTCTGCGGCTATTACAAGTAAAACCACTGATACAATTAACGTATCAAATATGACAGACTTTGGTTTCTTGATTGGTGATTACATTCAAGTCAATGATGAAATCATGAGAATCAAGACCACTGTAAGTAGAACTTCTGGTGTAACACAATTGAAGGTATTCAGAGGTGTTTATGGTTCTATCGCAGATACCCATGTATCTGGTTCAGTAGTTCAGAGAATTCTTTTCTATCCTATCGAATTTAGAAGAAACTCACTGATCAGAGCATCTGCACACACATTTGAATATCTTGGTTATGGTCCAGGTAACTACTCAACCGCATTCCCTGATAAGCAAACAAAACAACTTACACTTGATCAACAAATTACTGCTCAATCACAGTCCACTAGTGGTGGTGTTGTCAACTACACTGGTATGAATGATAGAGGTGACTTCTTTATTGGTAATAAGAGAATCGCATCTAATACTGGTAGAGAACAAGTTTATGATACGCCAGTTCAAACGATATGTGGAGAAGACCCATATACGGTTGGTTCTACAAACGATGTTTCCGATTTCAACTTTGTTGATAGTTCTGTGGTTAAGATTGAAAGAAACGTTGTTGTTGATGGTGGTGACAAGTCCAACATTCTCTCAGAGTTCAATGGTCCTGTTCAATTCACCAAAAAGGTAGTCAGTACTTCATCTGAAGGTATTGAAGCCAATAACATCTTCATTCAAGGTAATGCCCAGGTGTCTAGAAAAATCACTGTCGGTATTGCCACTCCATCTGATGCTGGTAACCCTGGTGATATCGTTTACAATGCAAACCCAGCAAGTGGTGGAACAGTTGGTTGGGTCTACACAACTAACAATGAGTGGAAGACATTTGGTACTATCAGTAGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1ef75b90fba0e9a18855aa622bbd407731a2ff2c556dddd7f6e77342d8548732
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8921
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50