Protein

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Genbank accession
YP_004323461.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,65
TF
Evidence RBPdetect2
Probability 0,53
Protein sequence
MASNILIKRSTGTTAPGTITFGELAVTTGANGTQANAGDRIFVGDNNGAAQIVGGRYFMDMLDHVHGTLTASSSVIVDSNSKIDVWNVDDITLNANIITTSTTDADLIFRANGTGKLVIEDGQELEFGTTGDVELSYNDSDAVLDVKRVAGTPDLRIADDMKLIFGNNKDFSIVYDETTSDKLKIDGADIEVGTTSTSKVNFANTTDASNVATAGVTFAGGIGVAATAHIKDLNVDDNTTIGTASGDSLTVNSTTVFQNQVTFNGTTNISGNTAQTGKIEIDNLKLDGNTLSTINSVQELIIDPDPATDAGGLVVIKGDLQIDGTTTTVNSASMSVNDPTIELGDPTTPVTLTAEAAGGQAVVVVDAIDQLQVGDAVTSSTAGIPNSTVINGINTGTKAVTLSNNLSQTMAAGSVLVTVSGADDALDRGVKIHYNSSGTNIFGFFGYDRTGGADGAGAWTFIENATDNNTVFGVTGNRGTVVIGDLELDTDLQVEFGGTGAGTWTTNGIVYGNGTSPMQVTAAANMGAPGTGADATTSYQVLTVTAAGVPVWTDTIDGGTF
Physico‐chemical
properties
protein length:561 AA
molecular weight: 57300,15380 Da
isoelectric point:4,05003
aromaticity:0,05169
hydropathy:-0,01230

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-HM2
[NCBI] 		445696 Uroviricota > Caudoviricetes > Eurybiavirus >
Host Prochlorococcus marinus subsp. pastoris str. CCMP1986
[NCBI] 		59919 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004323461.1 [NCBI]
Genbank nucleotide accession
NC_015284 [NCBI]
CDS location
range 68706 -> 70391
strand +
CDS
ATGGCATCCAATATTCTAATTAAAAGGAGTACTGGAACAACCGCACCTGGTACTATTACATTCGGTGAATTAGCCGTTACTACAGGAGCGAACGGTACACAAGCAAATGCAGGAGATCGTATATTTGTCGGAGACAATAACGGTGCTGCTCAGATTGTAGGTGGTAGATACTTTATGGACATGTTAGATCATGTTCATGGAACACTTACAGCAAGTTCATCTGTCATCGTAGATAGCAACTCAAAGATTGACGTATGGAACGTTGATGACATTACCCTCAATGCAAACATCATTACAACTTCCACAACTGATGCTGACCTTATCTTCCGTGCAAATGGCACAGGTAAGTTAGTAATCGAAGATGGTCAGGAACTAGAGTTTGGAACTACAGGAGATGTAGAACTCTCATACAATGACTCAGATGCAGTTTTAGATGTCAAGCGAGTAGCAGGAACCCCCGACTTGCGTATCGCTGACGATATGAAACTAATCTTTGGTAATAACAAAGATTTCTCTATAGTCTATGATGAGACGACAAGTGATAAACTAAAGATTGATGGTGCAGACATTGAAGTTGGAACCACATCAACCAGTAAAGTAAATTTTGCAAATACCACAGATGCTTCTAACGTTGCTACTGCGGGTGTTACTTTTGCGGGTGGTATTGGTGTTGCAGCAACAGCACACATCAAAGATCTTAATGTAGATGACAACACAACTATTGGTACAGCATCTGGAGACTCCCTTACAGTTAATTCAACAACTGTTTTCCAGAATCAAGTTACTTTCAATGGAACTACAAACATCTCTGGTAACACAGCTCAGACTGGTAAGATTGAGATTGATAACCTTAAGTTAGATGGTAATACACTATCTACTATCAACTCTGTTCAAGAATTGATAATTGACCCTGATCCTGCAACTGATGCGGGTGGTCTTGTTGTCATCAAAGGTGACTTACAGATTGATGGAACTACAACTACAGTGAACTCTGCTTCAATGTCAGTTAATGATCCTACAATTGAATTAGGAGATCCAACAACTCCTGTTACACTGACTGCAGAAGCAGCTGGTGGTCAGGCAGTGGTAGTTGTAGATGCTATAGATCAACTACAAGTTGGTGACGCAGTTACATCATCAACAGCTGGTATTCCTAATAGCACAGTTATCAATGGTATCAATACTGGAACTAAGGCAGTTACTTTAAGTAATAACCTTTCTCAAACAATGGCAGCTGGTTCTGTCCTTGTCACAGTGAGTGGTGCTGATGATGCATTAGATCGTGGTGTTAAAATTCACTATAATTCTAGTGGAACTAACATCTTTGGTTTCTTCGGTTATGACCGCACAGGTGGTGCCGATGGAGCTGGTGCATGGACATTTATTGAAAATGCAACAGATAACAACACTGTATTTGGTGTCACAGGCAACCGTGGTACTGTGGTAATTGGTGATCTAGAACTAGATACTGATCTTCAAGTGGAGTTCGGTGGTACTGGTGCAGGAACATGGACTACAAATGGTATTGTTTATGGTAATGGTACTAGTCCAATGCAAGTGACTGCAGCAGCAAACATGGGAGCACCAGGCACAGGTGCTGATGCAACAACTTCCTATCAGGTATTGACAGTAACAGCAGCTGGTGTGCCTGTCTGGACTGACACTATCGACGGTGGAACTTTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
71aeb1af164cb860fb9987b2f8b03cdc079ae0ca52e7376a09ad7136491f8d4b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7100
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage M4-259 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank