Protein

View in Explore
Genbank accession
QIN95345.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAVQIAPLPVMRFYDNNNNPLAGGQLFTYQAGTSTPAATYTDSTASTANLNPVILNARGEASVWLLATQAYKFILKDASGNTIWSVDNITSQNPVAVGNMTDEAGLGGTPGFAAGVDFTAGTTTSLTLSQYYGSAANLWVAFDASEQGADSYSLSGKTLTFNAPIPVGVNKVYVKGGSSLSVGTPSDGTVTDSKVASGSKLYNRITYLIDARDKGATGNGSTDDRTALAAADVTGNPWYLSAGTYRIGSNLTLNGHVTFLPGAVLKPDAGVTVTFAQNFTASPGGPQIFDLSNSGALISLPYNITEVWAEWWGANGNLVKTDNQIPIQQALNAVAATATGGSGVSYGHVRLGRGWFLVSDQINIPNYTKLIGSTAAYTVIQANPATWSGSQYMFVGTNSGKPMFDTGLWDMRISAHQITAINKVVYTDSWQEKSGLKNVLMRDFLNYGFFYEIGYGGAAQLFIEDCELVADATATAATSLFITNTSSQGWLNLSLRRTDLMSAAAAANNNIGCRADNRVMIVCDCVQFAVVSNGFLLSTYASVCGNGVNGEIPTTALFNMASGWTGTISVKGVMQAGATNIIVDSNRSGYAFAALAPLDGEVIWPPSANTALASASVNGGATPAFVYQNGKYATSPFASVTHSSTGVYLVTMASWLNDLANCDVIVSSQDSNTPIINYSNNTTTSFNIVTRNNSGVVTDSAGFALKLYHKN
Physico‐chemical
properties
protein length:711 AA
molecular weight: 74612,41280 Da
isoelectric point:5,03243
aromaticity:0,09845
hydropathy:0,03938

Domains

Domains [InterPro]
DC_2164
STR
1–711
DC_2164
IPR012334
STR
207–305
IPR012334 IPR012334
IPR011050
STR
208–283
IPR011050
QIN95345.1
1 711
Architecture
STR
STR 1-711
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIN95345.1
1 711
Domain Start End Length (AA) Confidence
N-terminal 1 224 224 0,9862
Central domain 225 600 377 0,9542
C-terminal 601 711 110 0,9818
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-224
Central
225-600
C-terminal
601-711

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage PBR31
[NCBI] 		2718947 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas campestris pv. campestris
[NCBI] 		340 Bacteria > Proteobacteria > Gammaproteobacteria > Xanthomonadales > Xanthomonadaceae > Xanthomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN95345.1 [NCBI]
Genbank nucleotide accession
MT119766.1 [NCBI]
CDS location
range 22527 -> 24662
strand +
CDS
ATGGCCGTTCAAATTGCACCGTTGCCGGTGATGCGGTTCTATGACAACAACAATAACCCGCTTGCTGGTGGGCAATTGTTCACGTACCAAGCCGGAACCTCGACACCCGCCGCCACTTACACCGATTCTACGGCTTCTACGGCCAACCTCAACCCCGTAATCCTGAACGCACGCGGGGAGGCTTCAGTATGGCTTCTGGCCACCCAAGCCTACAAGTTCATTCTGAAGGACGCGAGCGGTAACACCATCTGGAGCGTCGACAACATCACTTCGCAGAATCCTGTTGCTGTCGGAAATATGACAGATGAGGCGGGTTTAGGTGGAACCCCGGGATTTGCTGCTGGTGTTGATTTTACGGCTGGCACGACAACAAGTCTGACGCTTTCTCAATACTACGGAAGTGCAGCCAATCTTTGGGTTGCTTTCGATGCGAGCGAGCAAGGTGCGGACTCCTATTCGCTGAGCGGCAAAACCCTCACATTCAATGCGCCGATTCCAGTTGGAGTCAACAAAGTTTATGTTAAGGGCGGCTCCTCACTCTCTGTGGGAACGCCATCAGATGGCACGGTCACCGATTCAAAGGTGGCTTCTGGATCGAAGCTATACAACCGAATCACGTACCTCATCGATGCTCGCGACAAGGGTGCAACAGGAAACGGTTCCACTGATGACCGCACTGCACTTGCCGCAGCTGATGTTACTGGTAATCCATGGTATTTGTCGGCGGGCACCTACCGTATCGGCTCAAACCTCACGTTGAATGGACATGTCACCTTCCTACCGGGTGCCGTTCTGAAGCCTGATGCGGGTGTGACTGTTACGTTCGCGCAGAACTTCACCGCATCGCCTGGCGGTCCGCAAATCTTCGATCTGAGCAATAGCGGCGCGCTTATCTCGCTGCCCTATAACATCACTGAAGTATGGGCGGAATGGTGGGGAGCAAATGGGAATTTGGTCAAGACTGATAATCAAATTCCTATCCAACAGGCACTCAATGCGGTGGCCGCGACTGCAACAGGTGGATCGGGTGTTTCCTATGGGCATGTGCGCTTAGGTCGCGGTTGGTTCCTCGTGTCCGATCAAATCAATATTCCAAATTACACCAAGCTGATCGGTTCGACAGCAGCCTATACCGTCATCCAAGCCAACCCAGCAACATGGTCTGGTAGTCAATACATGTTTGTGGGCACTAACAGCGGCAAGCCGATGTTTGATACCGGCCTATGGGATATGCGCATCAGTGCGCACCAGATAACCGCCATCAATAAAGTGGTCTACACGGATTCCTGGCAGGAAAAATCAGGGCTAAAAAATGTCCTGATGCGGGATTTTCTGAATTACGGTTTTTTCTATGAAATAGGATATGGCGGGGCTGCGCAATTGTTTATTGAGGATTGCGAACTTGTGGCCGATGCGACCGCTACGGCTGCAACAAGCCTATTCATAACCAATACCTCGTCGCAAGGTTGGTTGAATTTGTCTTTACGGCGCACCGACTTGATGTCTGCTGCCGCAGCAGCGAATAACAACATTGGTTGCCGTGCGGACAATCGCGTCATGATCGTATGCGACTGCGTTCAATTTGCTGTGGTTTCGAATGGCTTCCTGCTGAGCACATATGCATCGGTATGCGGAAATGGCGTCAACGGTGAAATCCCGACTACTGCCCTATTCAACATGGCATCCGGATGGACGGGGACAATTTCAGTGAAAGGTGTTATGCAAGCTGGAGCAACCAACATCATTGTGGACAGCAACCGATCTGGATATGCATTTGCCGCCCTAGCGCCTCTTGACGGCGAGGTTATTTGGCCGCCATCTGCAAATACAGCACTGGCTTCTGCCTCTGTGAACGGCGGCGCAACGCCTGCCTTTGTATACCAGAACGGCAAATATGCCACATCACCTTTTGCGTCGGTGACGCATTCATCCACTGGAGTATATCTGGTCACAATGGCGTCTTGGCTGAATGACTTGGCAAACTGCGATGTGATTGTAAGCAGCCAAGACAGCAATACCCCAATTATCAATTATTCAAACAATACAACAACATCTTTCAACATCGTTACTCGCAATAATAGCGGCGTGGTAACAGATTCCGCAGGTTTTGCATTGAAGCTGTATCACAAGAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5a87d9818df6f81518792684a70aa3ae0608249eff864a7ebda3f60cac43e6e3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8356
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50