Protein

View in Explore
Genbank accession
YP_009778709.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MSQINFPNSPSDGEEFLASNGTTYRYDSSTGQWKILSGPGVQGPAGNTGPTGSIIMWGTSTLPEGYIECNGQSTSGYTALAALYGSNVPDLRGEFVRGWDNGKGTDSGRALLGSQGESFKSHTHTQNSHNHSQNSHNHTQNPHKHTQQLGGTISSDLLQSGSYRIGNANSASVSNTTATNKSTTATNNAATATNQSTGDTETRPRNISLMYIIKT
Physico‐chemical
properties
protein length:215 AA
molecular weight: 22715,16530 Da
isoelectric point:6,69696
aromaticity:0,06512
hydropathy:-0,79070

Domains

Domains [InterPro]
DC_1413
STR
5–215
DC_1413
IPR051934
Unmapped
39–214
IPR051934
SSF88874
STR
47–214
SSF88874
IPR037053
ATT
49–97
IPR037053
IPR011083
ATT
52–96
IPR011083
YP_009778709.1
1 215
Architecture
STR
ATT
STR
STR 5-48 | ATT 49-97 | STR 98-215
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014f_Syn7803C8
[NCBI] 		2790336 Uroviricota > Caudoviricetes > Pantevenvirales > Atlauavirus > Atlauavirus tusconc8
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009778709.1 [NCBI]
Genbank nucleotide accession
NC_047713 [NCBI]
CDS location
range 212572 -> 213219
strand +
CDS
ATGTCTCAAATTAATTTCCCAAATAGCCCATCCGATGGTGAAGAGTTTCTAGCATCTAATGGAACTACGTATCGATACGATAGTTCTACGGGTCAGTGGAAGATTCTATCAGGTCCTGGTGTTCAGGGACCCGCTGGTAATACAGGTCCTACTGGATCTATTATTATGTGGGGAACTTCAACACTACCAGAGGGATATATCGAATGTAATGGTCAATCTACTTCTGGATATACAGCTTTAGCTGCGTTATATGGTTCCAATGTCCCAGATCTTCGTGGTGAGTTTGTAAGGGGTTGGGATAACGGTAAGGGTACTGATAGTGGTCGGGCTCTATTGGGTAGTCAAGGCGAATCGTTTAAAAGCCACACACACACTCAGAATTCACACAATCACAGTCAGAATTCACACAATCACACACAGAATCCCCACAAACACACGCAACAACTGGGTGGAACTATTTCATCTGACCTTTTGCAATCCGGGAGTTATCGGATTGGTAACGCAAATTCTGCATCAGTTAGTAATACCACAGCAACCAATAAATCTACTACAGCAACCAATAATGCAGCCACAGCAACCAACCAAAGCACAGGTGATACTGAAACCCGTCCACGCAACATATCTTTGATGTATATTATTAAGACCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
7ea823a9784c9c2088431c5bc6ab5bab34ff41dca9794a4ddb20b07207dd689d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7715
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank