Protein

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Genbank accession
XYR93282.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,64
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSVLFSNNALTVLAAAVGQNEVTSTITVATGAGQRFAAPTNGDYQVITLSDPLYTRFEICHLTARTGDTLTVLRGQEGTTKQAWDVGDRIYASFTASTVGLFLRADTPASISGLWDFSTPPLINGNNIWHSGNVTPADRTKAQTISGLWTFTTLPKFNAFNFVTTQGATMVGPFLLYGSPTQDNEAATKLYVDNLAAGLHDKEAVVAASTDAGGNVNITSAPSTLDGVTLVAGNRILLKNQTNKTQNLIYVFNAVGQPLTAASDSDETGDLKAGSTVFVTGGTVNKNSRWTVITTDPITIGTTPIEWTQTSGAGQIRSGPGIKIIGDQISADVPAAGGLTVSVADGIGLSVMQDLVVNTGAAAAGTTGASLRYNSITVDKFGRVVNATNLPYALTTGAVFTGALTRTSTPSSGNDITTVDFVQNAIVSISTMRQPVAAVATSNVSLSGLGFIDGYQVKLGERVLVAGQTTQTANGVYVTTANAWVRASDFNSTSSLAAGVMFPVQNGTTFKNQIFMLSTQGTISIGTTPITFQRVTGTGLINKASGGGIDIVNDSIGLETQSGLTAGTYNTARVTVNSKGIITGIEAGSSGVTSFNGRSGVVMPATNDYTFAMLGGKPTTLAGYGITDPVMLRTGGTITGVVSIDYGNPAATDGPYPLLFMRLTEGERNTNKVGMNIIKEDRNSWAIAAVAGSDVVNITNGSKLNLRFQTAMVNDAEILTDANFDAWTAVAFSTGNTTRNAVARGCYMVDTTSLAGTLVLPSNPAPGTAVRVLDAGGTFGTKNLTISRNNARIVGALEDLVLDKNNGGVTLVYYNAARGWVPFFS
Physico‐chemical
properties
protein length:825 AA
molecular weight: 85633,08790 Da
isoelectric point:5,48123
aromaticity:0,07152
hydropathy:0,07794

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYR93282.1
1 825
Domain Start End Length (AA) Confidence
N-terminal 1 622 622 0,9852
Central domain 623 814 193 0,0804
C-terminal 815 825 10 0,9932
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-622
Central
623-814
C-terminal
815-825

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage PhiXhv-15
[NCBI] 		3447917 Viruses >
Host Xanthomonas hortorum pv. vitians
[NCBI] 		83224 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas hortorum

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR93282.1 [NCBI]
Genbank nucleotide accession
PV764602 [NCBI]
CDS location
range 200068 -> 202545
strand +
CDS
ATGAGCGTCCTGTTTTCTAACAACGCATTGACGGTGTTGGCAGCAGCGGTCGGTCAGAACGAGGTTACCTCGACTATCACTGTAGCAACTGGTGCGGGGCAGCGTTTCGCTGCCCCCACCAACGGTGACTATCAGGTCATTACGCTCTCCGATCCCCTGTATACCCGATTTGAAATCTGCCATCTAACTGCGCGCACGGGCGATACCCTCACTGTGTTGCGAGGGCAGGAAGGTACTACCAAGCAAGCGTGGGACGTTGGCGACCGCATTTATGCGTCCTTCACTGCTTCCACGGTCGGTCTCTTCCTGCGCGCTGACACTCCTGCGTCAATTAGCGGGCTGTGGGACTTCAGTACGCCGCCGCTAATCAATGGTAACAACATTTGGCATTCCGGCAACGTCACGCCTGCTGATCGTACCAAGGCGCAGACTATCTCCGGGCTCTGGACGTTCACGACGCTGCCCAAGTTCAACGCATTTAATTTCGTGACGACTCAGGGCGCAACTATGGTTGGGCCCTTTTTGCTTTATGGGTCCCCGACTCAGGACAATGAGGCTGCCACCAAGCTGTATGTGGACAACCTCGCCGCCGGTCTGCACGATAAGGAAGCAGTGGTCGCAGCCAGTACCGATGCCGGTGGTAATGTCAATATCACCAGCGCCCCGAGTACGCTGGACGGTGTGACTCTTGTGGCAGGAAATCGCATTCTGCTCAAGAATCAGACGAACAAGACCCAGAATTTGATCTACGTGTTCAACGCAGTTGGCCAGCCCCTTACCGCTGCTTCGGACAGTGATGAGACGGGTGATCTAAAGGCAGGTAGTACCGTATTCGTCACAGGCGGTACCGTCAACAAGAACTCACGTTGGACCGTCATCACCACTGACCCGATCACCATTGGCACCACTCCCATCGAGTGGACTCAGACGTCGGGTGCTGGTCAGATTCGTTCTGGCCCCGGCATCAAGATCATTGGTGACCAAATCAGCGCAGACGTTCCCGCTGCTGGCGGCCTGACGGTATCAGTTGCAGATGGCATTGGCTTGTCTGTGATGCAAGACCTAGTGGTCAACACCGGAGCTGCTGCCGCTGGAACCACGGGTGCCTCCTTGCGCTACAACAGCATCACGGTGGACAAGTTTGGTCGGGTAGTTAACGCTACCAACCTACCTTATGCTCTGACCACTGGCGCAGTGTTTACGGGAGCCCTCACTCGCACTTCGACTCCTTCTTCCGGCAACGACATTACCACCGTAGACTTTGTGCAGAATGCCATTGTCTCTATCAGCACCATGCGTCAGCCGGTTGCTGCGGTGGCTACGTCCAACGTTTCCCTAAGTGGCCTAGGCTTTATTGACGGGTATCAGGTCAAACTCGGCGAGCGTGTTCTCGTTGCAGGACAGACTACGCAGACTGCCAACGGTGTTTATGTCACCACGGCTAACGCGTGGGTGCGTGCTTCGGACTTTAACAGCACTTCGTCCCTCGCCGCTGGCGTCATGTTCCCGGTTCAGAACGGTACCACGTTCAAGAATCAGATATTCATGCTGTCCACTCAGGGCACCATCAGTATCGGTACTACCCCTATCACCTTCCAGCGTGTGACGGGTACGGGGCTGATTAACAAGGCGTCAGGTGGCGGCATTGATATTGTCAATGACTCCATCGGTCTCGAAACGCAATCGGGACTGACCGCAGGCACCTACAACACTGCTCGCGTCACTGTGAACAGTAAGGGCATTATCACTGGCATCGAGGCAGGCTCCTCGGGCGTGACCTCGTTTAATGGCCGTAGTGGCGTTGTGATGCCCGCTACGAACGATTACACCTTCGCTATGTTGGGTGGCAAGCCCACCACCCTCGCAGGCTACGGCATTACCGACCCGGTCATGCTCCGCACTGGCGGCACGATCACTGGTGTTGTGTCCATTGACTACGGCAATCCAGCTGCAACGGACGGTCCGTACCCACTGCTGTTCATGCGTCTTACCGAAGGTGAGCGCAATACCAACAAGGTTGGTATGAACATCATCAAGGAGGATCGCAATTCTTGGGCCATCGCTGCTGTAGCTGGTTCGGATGTAGTCAACATCACTAACGGCAGCAAGTTGAATCTGCGGTTCCAAACCGCAATGGTTAACGACGCTGAGATTCTCACTGACGCCAACTTTGATGCGTGGACTGCCGTTGCGTTCTCTACGGGTAACACCACTCGTAACGCGGTCGCGCGTGGGTGCTACATGGTAGACACTACCTCCCTTGCTGGTACGCTGGTACTGCCCTCCAATCCTGCTCCGGGCACAGCTGTTCGTGTTCTCGATGCTGGTGGTACGTTCGGTACCAAGAACCTGACTATCTCGCGCAACAACGCTAGGATCGTAGGCGCGCTGGAAGACTTGGTTTTGGACAAGAATAACGGTGGCGTCACGCTGGTTTACTACAACGCTGCACGTGGTTGGGTCCCGTTCTTTAGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5944ce82b23e28aadd0848af3c67084378f224146b74c81270d3e23a9a7a9f2f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7167
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50