Protein

View in Explore
Genbank accession
QXV74123.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MPGQSDNIILTTAGLNYLKARKQAGQKAVIQRFRIGDEYRFIPSEADTAIHGNQVYEGLAMEQMWWIQYSPDEIVVRCRVDSDKGDFLIGNLGLYTDTNELLFIRNFAYQHHKMHTTDKAPGGRWTFQLRIMTPNVLDLFDMSSIEQRYADMNERLLSDADTPSHPFDSFYTEIQLNDAFLPTNRSGFMTLSGRTSRSWYSPMFQMAESNVIVFDRYELSGGEASDRHQAIW
Physico‐chemical
properties
protein length:232 AA
molecular weight: 26760,74160 Da
isoelectric point:5,21972
aromaticity:0,12069
hydropathy:-0,47629

Domains

Domains [InterPro]
DC_1371
STR
3–110
DC_1371 DC_2244
IPR022225
ATT
8–117
IPR022225
QXV74123.1
1 232
Architecture
ATT
STR
ATT 3-117 | STR 118-232
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHEph12
[NCBI] 		2836128 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV74123.1 [NCBI]
Genbank nucleotide accession
MW980064.1 [NCBI]
CDS location
range 80835 -> 81533
strand -
CDS
ATGCCCGGACAATCAGACAACATCATTCTTACCACAGCGGGCTTGAATTATCTCAAGGCCCGCAAGCAAGCTGGTCAAAAGGCAGTCATTCAGCGCTTTCGCATTGGTGACGAGTATCGCTTTATACCAAGTGAAGCCGATACGGCGATCCATGGCAATCAAGTCTATGAAGGGCTAGCCATGGAGCAGATGTGGTGGATTCAGTATTCGCCGGATGAAATCGTCGTGCGTTGCCGCGTCGATAGCGACAAGGGCGATTTCCTCATTGGCAATCTCGGTCTTTATACCGATACCAATGAGTTGCTGTTCATTCGCAACTTCGCTTACCAGCATCACAAGATGCACACAACGGATAAAGCACCGGGTGGTAGGTGGACGTTCCAGCTTCGCATCATGACGCCGAACGTGCTCGATCTCTTCGATATGTCGAGCATCGAGCAGCGTTATGCCGACATGAACGAGCGGCTGCTTTCCGACGCCGACACGCCGTCGCATCCGTTCGATAGCTTCTACACCGAAATCCAACTCAACGACGCGTTTCTACCAACGAACCGTTCCGGCTTCATGACGCTTTCAGGCCGCACGTCGCGTTCTTGGTATTCGCCAATGTTCCAGATGGCCGAGTCCAACGTCATCGTCTTTGATCGCTATGAGCTTTCAGGCGGTGAAGCGTCTGATCGTCATCAAGCCATCTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
49d9638bd39b7f9b07da6520ff314ab02c9dc0b571be1a542028d7ba7f8ec3da
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6610
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Gonzalez,V. 2011 — GenBank