Protein

View in Explore
Genbank accession
AYH92122.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MADITHGTWIKDGKAVDKVFSNGRQVYGRNYYQQNTPAQIITLPNATYKPILMRPNADCPNGFMIIGAKDATGTLRFKNLITGNGRWTVSFYMRRPTVGAQYLTLDACDLSPVRLTTSDDTTWKKYVYTVNITNYSDVYNFVDFSSMSWSYFSIKDFKVEQGNTATGWSPAPEDAYCGRNLYVDTKSFNNPSAWVAYNSWTKTGDNFNGLAVMSGIQNWSGLRQVINVKKGETYTYSVYAKYASGTGSSNIYFNTSNTAINTDIVLQPVSLDDSWKRVSGTVTITADGTLAPRIERTSNNSNTLLIAGPKLERGSIATTYSEAPEDTN
Physico‐chemical
properties
protein length:328 AA
molecular weight: 36427,20370 Da
isoelectric point:8,74367
aromaticity:0,12195
hydropathy:-0,43140

Domains

Domains [InterPro]
DC_1746
STR
3–176
DC_1746 DC_1746
G3DSA:2.60.120.260
STR
154–312
G3DSA:2.60.120.260
IPR008979
STR
179–287
IPR008979
IPR003305
CBM
191–287
IPR003305
AYH92122.1
1 328
Architecture
STR
STR 3-328
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYH92122.1
1 328
Domain Start End Length (AA) Confidence
N-terminal 1 25 25 0,7855
Central domain 26 225 201 0,6115
C-terminal 226 328 102 0,2179
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-25
Central
26-225
C-terminal
226-328

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage Dionysus
[NCBI] 		2315484 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYH92122.1 [NCBI]
Genbank nucleotide accession
MH809530 [NCBI]
CDS location
range 62227 -> 63213
strand +
CDS
ATGGCGGATATAACACATGGAACGTGGATTAAAGATGGTAAGGCGGTAGACAAGGTGTTCAGCAACGGCAGGCAAGTTTACGGGCGTAACTATTATCAGCAAAACACACCAGCCCAAATTATCACACTGCCAAACGCCACTTACAAACCTATTTTAATGCGGCCAAACGCGGACTGTCCTAATGGGTTTATGATAATTGGTGCTAAAGACGCGACCGGTACATTGCGTTTTAAAAATTTAATTACGGGTAATGGACGATGGACAGTATCGTTTTATATGCGCCGACCCACGGTTGGTGCGCAATATTTAACGCTAGATGCTTGCGATTTATCACCGGTCAGATTAACTACCAGTGATGATACTACTTGGAAAAAATATGTTTACACCGTAAATATCACCAATTACAGTGACGTTTATAACTTTGTCGATTTTAGCAGTATGAGCTGGTCCTATTTTTCAATTAAGGACTTTAAAGTTGAGCAGGGCAACACGGCTACCGGCTGGTCACCAGCACCAGAAGACGCATATTGTGGACGAAACCTCTACGTTGACACAAAAAGCTTTAATAACCCGTCTGCTTGGGTAGCTTATAATTCTTGGACAAAGACAGGTGATAACTTTAACGGACTAGCAGTAATGTCAGGTATTCAAAACTGGAGCGGGTTAAGACAAGTTATAAATGTTAAAAAAGGGGAGACTTACACTTACTCAGTGTATGCGAAGTACGCTAGTGGTACTGGCTCATCTAATATTTACTTTAACACCTCAAATACAGCTATCAATACCGATATTGTTTTACAACCAGTAAGCCTAGATGACTCGTGGAAAAGGGTGTCTGGAACAGTAACTATCACCGCTGATGGAACGTTAGCTCCCCGTATAGAAAGAACAAGTAATAATAGTAACACCCTTCTAATAGCAGGGCCAAAGCTAGAGAGAGGTAGCATTGCTACAACCTACTCAGAAGCACCAGAAGACACCAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1ab604a1a348c6c6d413bc4a84b30fc4b0a342a39f55a8b5b2855b99c011edab
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7728
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lactobacillus phages that infect wine-derived L. plantarum strains Kyrkou,I., Byth Carstens,A., Ellegaard-Jensen,L., Kot,W. and Hestbjerg Hansen,L. 2018-12-03 — GenBank