Protein

Genbank accession
AIM50746.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSNNTYQHVSNESVYVEFDPTGSNFDSSITNVQAALASISAYGVKGVPDASEAEKGVIQLATEQEVLDGFNSTKAVTPATLNARLQYPNASETQYGVTKYATQEEAIAGTLDTVSITPLKLNQTIDNTFSTRYSTETTNGVIKIATQTAALAGSDDTTAMTPLKTQQLAIKLISQIAPNNDPASESITGVVRLATVAQTRQGTLREGYAISPYTFMNSVASQEYKGVIRLGTQAEINSNLGDVAVTGETLNGRGATGSMRGVVKLTTQAGVAPEGDSSGALAWNADVINTRGGQTINGSLNLDHLTANGIWSRGGMWKNGDQPVATERYASERVPVGTIQMFAGDSAPPGWVLCHGGTISGDQFPDYRNVVGTRFGGDWNNPGIPDMRGLFVRGAGTGSHILNNRGQDGYGKDRLGVGCDGMHVGGVQAQQMSYHKHAGGWGEYNRHEAPFGASVYQGYLGTRKYSDWDNASYFTNDGFELGGHRDATGTLNREGLIGYETRPWNISLNYIIKVHY
Physico‐chemical
properties
protein length:516 AA
molecular weight: 55084,12840 Da
isoelectric point:5,43065
aromaticity:0,08140
hydropathy:-0,40717

Domains

Domains [InterPro]
G3DSA:2.10.280.10
246–286
G3DSA:2.10.280.10 IPR037053 IPR044916
IPR015173
246–324
IPR015173 SSF88874
SSF69349
246–346
SSF69349 IPR027448
IPR011083
337–392
IPR011083
AIM50746.1
1 516
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Shf125875
[NCBI] 		1541825 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella flexneri
[NCBI] 		623 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Shigella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIM50746.1 [NCBI]
Genbank nucleotide accession
KM407600 [NCBI]
CDS location
range 92713 -> 94263
strand +
CDS
ATGAGTAACAATACATATCAACACGTTTCGAATGAATCGGTATACGTTGAATTTGACCCTACCGGGTCAAATTTTGATAGTTCAATAACCAATGTCCAGGCAGCCTTAGCCTCAATTAGCGCGTATGGTGTTAAAGGTGTTCCTGACGCAAGCGAAGCAGAAAAAGGTGTAATTCAATTAGCGACAGAACAAGAAGTTCTTGATGGATTTAATAGTACTAAAGCTGTTACACCCGCCACATTAAATGCAAGACTTCAGTATCCGAACGCGTCAGAAACACAATACGGTGTAACTAAATATGCAACACAAGAGGAAGCCATTGCCGGCACTTTAGACACTGTTTCTATTACTCCGCTTAAATTAAACCAAACTATTGATAACACGTTCTCTACTCGTTATTCCACCGAAACAACTAATGGTGTTATTAAAATTGCAACTCAAACCGCTGCACTTGCCGGGTCTGATGATACCACAGCAATGACACCGCTTAAAACTCAGCAATTAGCAATAAAATTAATTTCTCAAATAGCTCCTAATAACGACCCGGCTTCAGAATCTATTACCGGTGTTGTGCGTTTAGCTACGGTGGCTCAAACACGTCAAGGAACTCTTCGCGAAGGATATGCAATTTCCCCGTATACCTTTATGAATTCTGTTGCATCACAAGAATATAAAGGTGTTATACGTCTAGGAACACAAGCGGAAATTAATAGTAATTTAGGAGATGTTGCTGTAACAGGTGAAACGCTAAATGGTAGAGGAGCTACCGGTTCTATGCGTGGAGTCGTAAAATTAACGACGCAGGCCGGTGTTGCACCCGAAGGCGATAGCTCTGGAGCATTAGCATGGAACGCAGATGTAATTAATACACGCGGTGGGCAAACTATTAATGGTTCTTTAAATTTAGACCATCTCACAGCAAATGGAATTTGGTCACGTGGCGGAATGTGGAAAAACGGTGACCAGCCGGTTGCAACAGAGCGATATGCATCTGAACGTGTTCCTGTTGGAACAATTCAAATGTTCGCAGGTGATAGCGCTCCTCCAGGTTGGGTTTTATGTCATGGCGGGACCATTTCTGGAGACCAATTTCCGGACTATCGAAATGTGGTTGGAACGAGATTTGGCGGTGATTGGAATAATCCTGGAATTCCAGACATGCGCGGTCTTTTTGTTAGAGGAGCTGGTACAGGCAGCCATATTTTAAATAATCGCGGTCAAGACGGCTATGGAAAGGATAGATTAGGTGTAGGATGTGACGGCATGCATGTTGGTGGTGTCCAAGCACAACAAATGTCATATCATAAACATGCCGGTGGATGGGGCGAATATAATCGGCATGAGGCGCCGTTCGGAGCATCCGTATATCAAGGTTATTTGGGTACTAGAAAATACTCTGATTGGGATAATGCATCATATTTCACAAATGACGGCTTCGAATTAGGTGGTCACCGCGACGCAACAGGCACTCTTAACCGTGAAGGACTTATCGGATATGAGACTCGTCCATGGAATATATCTTTAAATTATATTATTAAAGTCCATTACTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
db69a9624bbb6825b46638ba56a487c1f02d83beea69e769dc9718c015a7fca9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6727
Evidence 0,6727
Download PDB

Literature

Title Authors Date PMID Source
Isolation and development of bioluminescent reporter phages for bacterial dysentery Schofield,D.A., Wray,D.J. and Molineux,I.J. — — GenBank