Protein

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Genbank accession
QIG74530.1 [GenBank]
Protein name
SGNH hydrolase-type protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSLMLGLSLSLNNQLGGGGGGGQTGTLRNVATRNLLPSTSTSGVKSARGRTQMFARDTISSAQFVFPNWLVAQIGGTGPYTEQANLGSITIQAAVEYPVGTTTAILFSGSTTGTIAAGDNLVSDALSISIPADAKFAVRWRINGASGLCYVSATTPAVTSASFGDAFDSSATVNALADNTTNTADAYTNNAIGACYGPIAVLSVSNKESVIAYGTSITHGENDTLDATLDLGIVARGVGMTSGYINCGVRGDSAYRAVNVLGTSNFAKRAALALYATRAIIEYGANDVGTVEARTAAQCLADRATMYAYIKSVAPSIRIYQTTTTPLAASTDSFATTTNQTADATITPKLTSINDAVRAGGIANLDGYYDVSDVVCTARNSGIWKCPASYTPMTSGGGLHPLQAGYRYVRDLGLFQIAATGQTIGLVANRAQVPTNVQNIAANTTARRAHWSHASGEISHIQAVDVGWYLSRSTWLPTAGGSHTIKKYIEYPAGTFHQVTWAAATTLAKSSTSVAKSDVIISSVTGLPLRIPADTQFWERTVVTVGSATTPVIELPANNDTLGVDDGTDLTDKGNSGTITPTAAIWTFGSQGFVGRVGAANAQSVVALGDSLIFAQGDITNVGTKQGSGWFGRLCDNEGVPYVKIAVPGGKAQNFAQNAFIVHGGNLINQLAFSHVICELGLNDLAVASRTAAQILADLQTVYAIIPAAAQLWQTTITTRTDSTSGNYTSVADQTVKTDGNMADLTPLNTSIRAGTANVDFVLDVADAEMSARDSNIHGGPFPPVLDGTHFTSTKAAAIASALSL
Physico‐chemical
properties
protein length:805 AA
molecular weight: 83325,14770 Da
isoelectric point:5,78578
aromaticity:0,07081
hydropathy:0,07130

Domains

Domains [InterPro]
IPR036514
STR
195–412
IPR036514 IPR051532
IPR036514
STR
196–412
IPR036514 SSF52266
SSF52266
STR
203–410
SSF52266 IPR036514
cd00229
ENZ
210–412
cd00229 SSF52266
IPR013830
ENZ
212–407
IPR013830
QIG74530.1
1 805
Architecture
STR
STR
STR 195-412 | STR 590-805
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG74530.1
1 805
Domain Start End Length (AA) Confidence
N-terminal 1 18 18 0,2005
Central domain 19 246 229 0,4332
C-terminal 247 805 558 0,6612
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-18
Central
19-246
C-terminal
247-805

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y25
[NCBI] 		2509588 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG74530.1 [NCBI]
Genbank nucleotide accession
MN988538 [NCBI]
CDS location
range 18153 -> 20570
strand +
CDS
ATGAGCCTCATGCTTGGATTGTCCCTTTCCCTCAATAACCAGTTGGGCGGGGGTGGTGGCGGTGGACAGACCGGCACGCTCCGCAATGTTGCCACCCGCAACCTCTTGCCAAGCACCAGCACGTCAGGCGTCAAATCGGCACGCGGTCGGACGCAGATGTTCGCCCGCGATACCATCTCATCGGCTCAGTTCGTTTTCCCCAACTGGCTTGTCGCGCAGATCGGCGGCACCGGACCTTACACGGAACAGGCCAATCTCGGCTCCATAACGATCCAGGCCGCTGTTGAATATCCTGTCGGCACCACAACAGCGATTCTATTCTCTGGCTCGACGACAGGCACGATTGCCGCCGGTGACAATCTCGTCAGTGACGCCCTGTCCATCAGCATCCCGGCTGACGCCAAATTTGCTGTGCGCTGGCGCATCAATGGCGCATCCGGCCTTTGCTATGTTTCCGCAACAACACCCGCCGTCACGAGCGCGTCCTTCGGGGACGCATTCGATTCCTCGGCCACGGTTAACGCCCTCGCGGACAACACGACAAACACTGCTGACGCCTATACCAACAACGCCATCGGCGCCTGCTACGGCCCGATTGCCGTTCTCTCTGTCAGCAACAAAGAGAGCGTCATTGCCTACGGCACGTCGATCACGCACGGTGAGAACGACACACTGGATGCCACGCTCGACCTCGGAATCGTTGCTCGAGGCGTAGGCATGACCAGCGGCTATATCAATTGCGGTGTCCGCGGTGACAGTGCTTACCGAGCCGTCAATGTCCTCGGCACGAGCAATTTCGCCAAGCGCGCCGCATTGGCTCTCTACGCCACCAGGGCGATCATCGAGTACGGCGCGAACGACGTTGGTACGGTTGAGGCTCGAACTGCAGCGCAATGCCTTGCCGACCGCGCCACGATGTATGCCTACATCAAATCTGTCGCGCCCAGCATCCGCATCTACCAGACCACGACAACGCCCCTCGCTGCGTCAACCGACTCCTTCGCGACCACGACGAACCAGACCGCGGATGCTACCATCACGCCGAAGTTGACGAGCATCAATGATGCAGTCCGCGCCGGCGGGATCGCCAACCTGGACGGCTACTATGACGTCTCGGACGTAGTCTGCACGGCGCGGAACTCTGGCATCTGGAAATGCCCCGCCAGCTATACCCCGATGACGAGCGGCGGCGGCCTTCACCCGCTCCAGGCTGGCTATCGCTATGTCCGCGACCTCGGCCTGTTCCAGATCGCCGCGACAGGTCAAACGATCGGCTTGGTCGCCAACCGCGCCCAAGTGCCCACCAACGTCCAGAACATCGCCGCGAACACGACGGCTCGACGGGCGCATTGGTCGCACGCTTCCGGTGAAATCTCGCACATCCAGGCGGTTGATGTCGGCTGGTATCTGTCGCGCTCCACATGGCTCCCGACCGCCGGCGGCTCTCACACGATCAAGAAGTACATCGAATACCCTGCCGGCACTTTCCATCAGGTAACGTGGGCAGCGGCAACAACGCTCGCCAAAAGCTCCACGAGTGTCGCCAAGTCAGATGTCATCATCTCATCTGTCACCGGGCTTCCGCTCCGTATCCCGGCCGACACGCAGTTCTGGGAGCGAACAGTGGTCACCGTTGGCAGCGCGACAACGCCTGTCATCGAACTGCCGGCCAACAATGACACCCTCGGCGTAGACGATGGAACCGACCTGACGGATAAGGGAAACAGCGGCACAATCACCCCGACCGCAGCTATATGGACATTCGGTTCTCAGGGCTTTGTCGGAAGGGTCGGCGCCGCCAACGCTCAAAGTGTCGTGGCGCTCGGCGACAGCCTTATCTTCGCGCAGGGAGACATAACAAACGTCGGCACGAAGCAAGGCAGCGGCTGGTTTGGGCGCCTCTGCGACAACGAGGGCGTTCCCTATGTGAAGATTGCTGTTCCTGGCGGGAAGGCTCAGAACTTCGCCCAGAATGCCTTTATCGTCCACGGCGGCAACCTTATCAATCAGCTCGCCTTCTCGCATGTCATTTGCGAACTCGGACTGAACGACCTTGCTGTTGCAAGCCGAACGGCCGCGCAGATCCTCGCCGACCTCCAGACCGTCTACGCTATAATCCCGGCAGCCGCCCAGTTGTGGCAGACCACGATCACCACCCGGACAGACAGCACCAGCGGCAATTATACCTCTGTAGCCGACCAGACCGTCAAGACCGATGGCAACATGGCCGATCTCACCCCGCTCAACACCTCGATCCGAGCTGGGACAGCCAATGTCGATTTCGTTCTTGATGTAGCGGATGCCGAGATGTCGGCGCGGGATAGCAACATCCATGGCGGGCCTTTCCCGCCGGTTCTCGACGGCACGCATTTCACGTCGACCAAGGCTGCGGCAATCGCGTCCGCCCTATCTCTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
41a02f2fada860d487f3ea6df4d46e109c7a1005ec4d9622750e8ad84ac65ca6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2944
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank