Protein

View in Explore
Genbank accession
QHR74612.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MATVTVIPSDITKLKNDVSTLKQDVATIPGDITKLKSDVSTLKQDVAGKASTADVDNKLKPYLKQTDLSSELGSGRYSGSFYPLTGNDAFYLFNINTTAQSANLWLDPNAGVSQVLRSTSSSRYKRSVESVIDEYADLMLEMRPVWYRSTCESDRKDWGWYGLIAEEVGEVAPEYVHWRPLQEGEDPAIASSNGMVAEGVMYDRLTVPLIHHVKKLKAENDEMRKEIDELKAVVEALVNKPTTLD
Physico‐chemical
properties
protein length:245 AA
molecular weight: 27238,38660 Da
isoelectric point:4,97713
aromaticity:0,07347
hydropathy:-0,41061

Domains

Domains [InterPro]
G3DSA:1.20.5.170
STR
3–50
G3DSA:1.20.5.170 IPR030392
DC_0536
STR
3–245
DC_0536
Coil
Unmapped
213–240
Coil
QHR74612.1
1 245
Architecture
STR
STR 3-245
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage tunus
[NCBI] 		2696456 Uroviricota > Caudoviricetes > Drexlerviridae > Warwickvirus > Warwickvirus tunus
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR74612.1 [NCBI]
Genbank nucleotide accession
MN850638.1 [NCBI]
CDS location
range 49584 -> 50321
strand +
CDS
ATGGCTACAGTCACTGTTATACCTAGTGATATAACGAAGCTGAAAAATGACGTTTCAACACTAAAACAGGATGTTGCTACTATTCCTGGTGATATAACGAAGCTGAAAAGTGATGTTTCGACACTAAAACAGGATGTTGCAGGAAAAGCATCAACTGCTGATGTTGACAATAAGTTGAAACCGTATCTAAAACAAACTGATCTATCATCCGAGTTGGGTAGCGGAAGGTATAGTGGGAGTTTTTACCCCCTAACTGGTAACGATGCATTTTATTTATTTAATATTAACACAACCGCTCAATCAGCAAACTTATGGCTTGATCCAAATGCTGGAGTGTCGCAAGTTTTACGCTCAACTTCCTCTTCTCGTTATAAGCGCAGCGTAGAATCGGTTATTGATGAATATGCGGATCTGATGCTTGAAATGCGTCCTGTGTGGTATCGGTCAACTTGTGAAAGCGACCGTAAAGATTGGGGATGGTACGGACTGATTGCAGAGGAAGTTGGAGAGGTTGCGCCGGAGTACGTTCACTGGCGACCTCTGCAAGAAGGAGAAGATCCTGCCATTGCTTCAAGTAATGGCATGGTGGCGGAAGGCGTTATGTATGACCGCCTCACTGTTCCACTGATTCACCACGTTAAGAAACTGAAAGCGGAAAACGATGAGATGAGAAAAGAAATTGACGAGCTAAAAGCGGTTGTAGAGGCACTGGTAAACAAACCAACCACGTTAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7e7340560b9e57272f05bd13385268b7ef7213851f88d03228199ad4e36f8e14
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8017
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank