Protein

View in Explore
Genbank accession
QPZ53664.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MASKANLIREYCKANGVSNVDFRSDVMLQDDSNGQGAYIKEWNLDIAQPTDEQLTSYETAANTAESNAQVDATRRQAYGSWNDQLDEIFHDIDAWKARIQGIKTNNPKS
Physico‐chemical
properties
protein length:109 AA
molecular weight: 12244,18350 Da
isoelectric point:4,59290
aromaticity:0,08257
hydropathy:-0,85046

Domains

Domains [InterPro]
DC_0890
STR
1–109
DC_0890
IPR019094
STR
11–65
IPR019094
IPR035950
STR
16–66
IPR035950
IPR035950
STR
21–57
IPR035950
QPZ53664.1
1 109
Architecture
STR
STR 1-109
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC203P
[NCBI] 		2796523 No lineage information
Host Candidatus Pelagibacter sp. FZCC0015
[NCBI] 		2268451 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53664.1 [NCBI]
Genbank nucleotide accession
MW273925.1 [NCBI]
CDS location
range 13699 -> 14028
strand -
CDS
ATGGCTAGTAAAGCAAATTTAATCAGAGAATACTGCAAAGCTAATGGAGTTAGCAATGTAGATTTTAGAAGTGATGTCATGTTGCAAGACGACAGTAATGGTCAAGGTGCGTATATCAAAGAATGGAACTTAGATATTGCACAACCAACTGATGAGCAATTAACATCATACGAAACTGCTGCAAATACTGCTGAGAGTAATGCTCAAGTAGATGCAACAAGACGACAAGCCTATGGTTCTTGGAACGATCAATTAGATGAAATATTTCATGACATAGATGCTTGGAAAGCAAGAATACAAGGAATTAAAACAAATAACCCAAAGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b03d3fc7aeae0c8be37c0643462791b7e1fb54232ad6b3188befc2c491951a0b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9658
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank