Protein

View in Explore
Genbank accession
QDH84085.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNSQNPFPSGDSCCGTNYDMTVDQLLGNAYQVVKFVAMRMPFIKTVSDNIQSVIDIATNLGKLLELQDKLPELLALQGQLQKLIALFDQLQELVALADNLPQLLTVYDNLDNIQAIVDNMNQIHTVSAEIAKIVSVANNISAVVNVSANLAAILNVETNLPAVDNVSTNITDVRNVSTNMSAVVGVNSNMATVLSVAEFIPELTNINNELVNALEYIEALSGPSGSTQLGHTNSDGSEVTVSTALNDLGANKLSKVAVFGSKTVDVLYRNGVIYESKGTVTKQETRVWMHDFRPTIEDGAAFNTDGGNIFLGHGAGGVSLTALPDADVPPGKDANLQASHNIGIGVQALGSVTIGYKNVAVGNNALRKNTEGHGNSAFGRDAGHENTTGNENTFLGFTAGQLSATGHYNTYSGTSSGYNNTAGQGNTAHGRRALFGMTSGDYNTGIGENAGFGHLSGSYNLYLGKQAANAGITTGSNATVIGSRISGLPNISGVVAIGDGAGKLYVSIFPTGGSPSRMLVESTSATAYDASSVNGQSDQGTSLVLVNNANSATAFSQIAATSRVGGTYGRLVFSGGVNPFIALVSNNQELVRFTPTGGLRFGGATGVAILTGAGSPEGVVTAPPGSMYLNTSGGSGATLWIKEANNTATGWVAK
Physico‐chemical
properties
protein length:654 AA
molecular weight: 67559,41370 Da
isoelectric point:5,03965
aromaticity:0,06116
hydropathy:-0,01437

Domains

Domains [InterPro]
DC_0265
STR
1–65
DC_0265 Coil
DC_0265
STR
76–652
DC_0265
QDH84085.1
1 654
Architecture
STR
STR
STR 1-65 | STR 76-652 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDH84085.1
1 654
Domain Start End Length (AA) Confidence
N-terminal 1 296 296 0,8188
Central domain 297 495 200 0,8850
C-terminal 496 654 158 0,9494
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-296
Central
297-495
C-terminal
496-654

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage vB_AxyP_19-32_Axy12
[NCBI] 		2591043 Uroviricota > Caudoviricetes > Schitoviridae > Dongdastvirus > Dongdastvirus Axy12
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH84085.1 [NCBI]
Genbank nucleotide accession
MK962631 [NCBI]
CDS location
range 65895 -> 67859
strand -
CDS
ATGAACTCCCAAAATCCGTTCCCCAGTGGTGATAGCTGCTGCGGAACCAATTATGATATGACGGTGGACCAACTGTTGGGTAATGCCTATCAGGTGGTGAAGTTCGTCGCCATGCGGATGCCGTTCATCAAGACGGTGAGCGATAACATCCAATCTGTGATTGATATCGCCACCAATTTGGGCAAACTTCTGGAGCTGCAAGACAAGCTGCCGGAGCTGTTGGCATTGCAGGGTCAACTGCAAAAGCTTATTGCTCTGTTCGATCAGTTGCAGGAACTGGTAGCCCTGGCCGACAATTTACCTCAACTGCTGACGGTCTACGACAACCTGGATAACATCCAGGCTATTGTGGACAACATGAATCAGATCCACACAGTCTCCGCTGAGATTGCCAAGATCGTGTCGGTGGCTAACAACATCTCAGCAGTGGTGAATGTCAGTGCCAATCTGGCAGCGATCTTGAATGTTGAGACGAACCTGCCTGCTGTGGACAACGTTTCCACCAACATAACGGATGTGCGTAACGTCAGCACCAATATGTCTGCTGTGGTTGGTGTCAACAGCAACATGGCTACTGTATTGAGTGTTGCTGAGTTTATTCCCGAACTCACCAATATCAACAATGAGCTTGTCAACGCCCTTGAATACATTGAAGCATTGAGTGGTCCCTCGGGTTCTACTCAATTGGGCCACACGAACTCTGATGGTAGCGAGGTGACCGTCTCCACTGCACTCAATGATCTCGGTGCAAATAAATTGTCCAAGGTTGCTGTCTTCGGAAGTAAGACCGTGGATGTGCTGTACCGTAACGGAGTCATCTACGAAAGCAAGGGCACTGTCACCAAACAAGAAACCCGTGTATGGATGCATGATTTTCGTCCTACTATTGAGGATGGTGCTGCCTTCAACACGGATGGCGGTAACATCTTTTTGGGGCATGGTGCAGGGGGTGTGTCGCTAACGGCACTTCCGGATGCTGATGTTCCTCCGGGTAAAGATGCCAATCTCCAGGCATCCCACAATATCGGTATCGGTGTGCAAGCTCTTGGTAGCGTCACCATCGGCTACAAAAACGTGGCGGTTGGTAATAACGCACTTCGTAAGAACACCGAAGGGCACGGAAATTCGGCGTTTGGCCGAGATGCTGGTCACGAAAACACTACCGGTAACGAGAATACGTTTCTCGGGTTCACTGCTGGACAACTCAGTGCAACGGGTCATTACAATACGTATTCCGGTACGTCCAGTGGGTACAACAACACCGCTGGACAAGGTAATACTGCACATGGTCGTCGTGCTTTGTTTGGCATGACTTCCGGTGACTACAACACCGGTATTGGTGAAAATGCTGGATTTGGTCACTTGTCCGGTAGCTACAACCTTTACCTCGGTAAGCAAGCAGCCAATGCTGGTATCACGACTGGGTCCAATGCTACTGTTATTGGTTCCCGTATCAGTGGTCTTCCGAACATCAGCGGTGTGGTGGCCATTGGTGATGGTGCGGGCAAACTGTACGTCTCCATTTTCCCCACTGGTGGGTCACCCTCTCGTATGTTGGTTGAGTCCACATCGGCCACTGCTTATGACGCTTCTTCGGTCAATGGGCAGTCTGATCAGGGCACCTCCTTGGTGCTTGTAAACAACGCCAATAGTGCCACTGCGTTCTCCCAGATTGCAGCCACTTCGCGTGTTGGGGGCACTTACGGTCGATTGGTATTCTCTGGTGGTGTGAATCCTTTCATCGCCCTCGTCAGCAATAACCAAGAACTGGTACGCTTCACTCCCACGGGCGGTCTGCGTTTTGGTGGAGCAACCGGAGTTGCCATATTGACGGGTGCTGGTTCTCCGGAAGGCGTCGTCACTGCGCCCCCTGGTTCCATGTATCTCAATACCAGTGGAGGTTCGGGGGCCACCTTGTGGATCAAGGAGGCAAACAATACCGCAACCGGTTGGGTTGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f3f0c21008d1fbc6c3ac1197782e6458badd2055555530a3966f9ed8632ea0f2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6896
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of sixteen phages from Abidjan, cote d'Ivoire, isolated on a single strain of Achromobacter xylosoxidans Essoh,C., Vernadet,J.-P., Vergnaud,G. and Pourcel,C. 2020-01-02 — GenBank