Protein

View in Explore
Genbank accession
YP_010648251.1 [GenBank]
Protein name
host range and adsorption protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MQIWIHDKSMRKVCALNNNVPGMLPYSNSQWHTYLEYSTSTLDFTIPKIVNGKLHDDLKYINDQMYVSFYYDNSYHVFYVSQLIENDFSFQVTCNNTNLELSAEIERPLASVDGAKTLEWYLQTLDLLGFAGLEVGFNEIPDRTRTITFESQNGTKLEQLHSLMNQFDAEFIFRTELNRDGTLKSFVIDIYQRPDGNHHGIGKVRGDVVLYYQSGLKGVQVSSDKTQLFNAGLFLGKDGLNLGSVVFEEKNELGQVEFYSFKDSPMVYAPLSADNYPSAIGGANEIDRWTRRDFQTEYSDVDSLKAYALRTIKQYAYPLMTYTVSVQSSFIENYKDINLGDTVKIIDNNFRGGLALEARVSEMIISFDNPTNNSVVFTNFRKLDNKPSSELQQRIDEIVSKSLPYHVEIRTTNGTVFKNGIGRSTVKPVLKQGDKIVDATYRFVIDGTIKYVGMTYDMVASEITQPTTLTIAAWVDNKEVASEEITFLNVSDGKQGPKGPQGPQGPKGDRGNDGIAGKDGVGLKTTTIIYGISDSDTAMPTNWTSQPPALIKGKYLWTKTVWTYTDSSSETGYQKTYIAKDGNDGNDGLPGKDGVGLVNTKIEYLKHTDGQIAPNPKYYSSFNWKGLTLSQHLEHDYVNDLTLIKSGKPVKYTDLKVGELVIDRTGEIFPIKEIFGTGGDSSNPGYINLKPSIGKWSKDIPTVNPGEYLWTRTTWFYSDGTSEQGFSVAKMGEQGPKGDRGDRGPQGVQGLQGPKGDQGIPGPKGADGKTQYTHIAYADTVSGSGFSQTDVNKAYIGMYQDFNAEDSKNPQDYRWSKWKGSDGRDGIPGKAGADGRTPYVHFAYADSADGRTGFSLTQTGNKRFLGVLTNFIKEDSTNPEDYTWNDTAGSVSVGGENLIINSAFPKNLDNWGFWETGLPNENLHIATHDFYYNDTKNLFRLDSDGKGVPASSRRFPVKRNTDYSLNIQTFATWNIKGVTIYFLGRKANETDKTFTKVVHVKTYSGSPSVTQAVKWHLIFNSGDCDEGYIRIDNNGTTDGKTSMLFFAELDCYEGTTDRAWQASTKDLEEEMGTKADAAMTIEQINALNERAAIIKAEMEAKASAEILNNWIKNYQDFVKANETERAAAEKALVSSSQRVSTIAKDLGELSDRWNFIDTYMSSSNDGLVIGKNDGSSSIMFNPNGRISMYSAGSEVMYISQGVIHIENGIFSKTIQVGRYREEQYHLNPDMNVIRYVGGF
Physico‐chemical
properties
protein length:1239 AA
molecular weight: 138049,12460 Da
isoelectric point:5,31248
aromaticity:0,10977
hydropathy:-0,53398

Domains

Domains [InterPro]
DC_0002
STR
1–659
DC_0002 DC_1545
IPR010572
ENZ
141–382
IPR010572 PTHR24637
G3DSA:1.20.5.320
STR
491–540
G3DSA:1.20.5.320 IPR008160 DC_0002
YP_010648251.1
1 1239
Architecture
STR
STR
STR 1-659 | STR 665-1239
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage vB_SthS_VA214
[NCBI] 		2069608 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010648251.1 [NCBI]
Genbank nucleotide accession
NC_070725 [NCBI]
CDS location
range 18537 -> 22256
strand -
CDS
ATGCAAATTTGGATTCATGATAAAAGCATGCGCAAGGTGTGTGCACTGAATAATAACGTTCCTGGCATGCTTCCGTACTCAAACAGTCAATGGCACACCTACCTTGAATACTCAACCAGTACACTTGACTTCACAATTCCTAAAATTGTAAATGGAAAACTTCACGATGATTTAAAATATATCAATGATCAGATGTATGTGTCGTTTTACTATGACAATTCCTATCACGTTTTCTATGTTTCTCAACTCATTGAGAACGATTTTAGTTTTCAAGTTACTTGTAACAATACCAACTTGGAACTATCAGCAGAAATAGAGCGTCCGTTAGCTAGTGTTGACGGTGCTAAAACACTTGAGTGGTATCTTCAAACCCTTGATTTACTTGGTTTTGCTGGCCTTGAAGTTGGTTTCAATGAGATTCCTGATAGGACAAGAACTATCACGTTTGAATCTCAAAATGGCACAAAATTAGAACAGCTTCATAGCTTGATGAACCAGTTTGATGCTGAGTTTATTTTCCGTACCGAATTAAACCGAGATGGTACTTTGAAAAGCTTCGTTATTGACATTTACCAACGACCAGATGGAAATCATCATGGAATTGGTAAGGTTAGAGGTGATGTCGTTCTATACTATCAAAGCGGTCTTAAAGGCGTTCAAGTATCTAGTGATAAGACTCAACTCTTCAACGCTGGTCTTTTCCTCGGAAAAGATGGATTAAACCTAGGAAGCGTTGTGTTTGAGGAAAAGAATGAGTTAGGACAAGTAGAGTTCTACTCATTTAAAGACAGTCCGATGGTTTACGCACCTTTATCAGCAGATAACTATCCATCGGCCATTGGCGGTGCTAATGAAATAGATAGATGGACACGTAGGGACTTTCAAACAGAATACAGTGATGTTGATTCCCTCAAAGCTTATGCCTTGCGTACTATCAAACAGTATGCTTATCCTCTAATGACATATACTGTCAGCGTTCAATCTAGTTTCATTGAAAACTACAAGGATATTAATCTAGGTGACACTGTTAAAATCATCGATAATAATTTTAGAGGTGGTTTAGCCCTCGAAGCGCGTGTATCTGAAATGATTATCAGCTTTGACAATCCTACAAACAATTCGGTTGTTTTTACTAATTTCAGAAAGTTGGATAATAAACCGTCTAGTGAATTGCAACAACGTATCGATGAGATTGTTTCTAAGTCACTGCCATATCATGTTGAGATAAGGACCACGAATGGTACAGTATTTAAGAATGGTATTGGTCGTTCTACTGTTAAACCAGTTTTGAAACAAGGCGATAAAATTGTTGATGCAACTTATCGATTTGTGATTGACGGAACTATTAAATACGTAGGTATGACTTACGATATGGTAGCGTCAGAGATAACTCAACCAACAACGTTGACGATTGCTGCGTGGGTAGATAATAAAGAAGTAGCTTCGGAAGAGATTACTTTCTTAAACGTCTCAGATGGTAAACAAGGACCTAAGGGCCCACAAGGACCACAAGGACCTAAAGGAGATAGAGGTAATGATGGAATTGCAGGTAAGGATGGGGTTGGATTAAAGACCACAACTATCATTTATGGAATAAGCGATAGTGACACTGCTATGCCTACTAACTGGACTAGTCAACCACCAGCATTAATTAAAGGGAAATACCTATGGACCAAAACAGTATGGACATATACGGACTCATCTAGTGAGACTGGCTATCAAAAAACTTACATTGCCAAAGATGGAAATGATGGAAATGATGGCCTTCCGGGTAAAGACGGTGTAGGTCTAGTTAATACAAAAATTGAGTATTTGAAACATACAGACGGTCAGATAGCACCTAATCCAAAATACTACTCAAGTTTCAATTGGAAAGGTTTAACATTATCTCAACATTTAGAGCATGATTATGTTAACGACCTGACACTTATCAAGAGTGGTAAACCTGTCAAATACACTGACTTAAAAGTCGGTGAGCTTGTAATTGATAGAACCGGTGAAATTTTCCCTATCAAAGAAATCTTTGGGACTGGAGGAGATAGCAGTAACCCAGGATACATTAATCTAAAACCTTCAATTGGAAAATGGAGTAAAGATATTCCAACAGTTAATCCCGGTGAGTATCTCTGGACAAGGACTACGTGGTTCTATTCAGACGGTACGAGTGAGCAAGGTTTTTCCGTTGCTAAGATGGGTGAACAAGGTCCAAAAGGTGACCGTGGAGACCGTGGACCTCAAGGTGTTCAAGGATTACAAGGACCCAAAGGTGACCAAGGAATACCAGGACCAAAAGGTGCTGACGGAAAAACGCAATACACCCATATAGCTTATGCCGACACTGTTTCTGGTAGTGGTTTTAGTCAAACAGATGTCAATAAAGCCTATATTGGTATGTACCAAGACTTCAATGCCGAAGATAGCAAAAATCCACAAGACTATCGTTGGAGCAAGTGGAAAGGTAGTGATGGTCGTGATGGCATTCCTGGAAAAGCTGGAGCAGACGGACGGACTCCTTACGTCCACTTTGCCTATGCAGACAGTGCCGATGGTAGAACTGGTTTCAGTTTGACCCAAACTGGTAATAAACGCTTTTTAGGTGTGCTAACCAACTTCATAAAAGAAGACAGCACTAATCCAGAAGATTATACATGGAATGATACGGCTGGCAGTGTTTCGGTTGGTGGTGAGAATCTAATCATTAACTCGGCTTTCCCGAAGAATCTTGACAATTGGGGATTTTGGGAAACGGGATTGCCTAACGAAAATCTTCATATAGCAACACATGATTTTTATTACAATGATACAAAAAATCTATTTAGACTAGATAGTGATGGTAAAGGGGTTCCTGCATCATCAAGACGTTTTCCAGTTAAACGTAACACTGATTATTCTCTCAATATTCAGACGTTTGCAACTTGGAATATCAAAGGTGTAACTATCTATTTTTTGGGTCGGAAGGCAAATGAAACTGACAAGACATTTACTAAAGTCGTGCATGTAAAAACATATTCTGGTTCACCATCGGTGACACAGGCGGTTAAATGGCATCTAATATTTAATTCTGGAGATTGCGATGAAGGGTACATTCGCATTGATAATAATGGTACTACTGACGGTAAAACATCTATGCTATTCTTCGCTGAGTTGGACTGTTACGAGGGAACAACCGATAGAGCATGGCAAGCGTCAACTAAGGACTTAGAAGAAGAGATGGGAACTAAAGCCGATGCTGCTATGACGATTGAACAGATTAATGCACTTAATGAAAGGGCTGCAATCATTAAAGCAGAGATGGAAGCCAAAGCAAGCGCTGAAATTTTGAATAACTGGATTAAAAATTACCAAGATTTCGTTAAGGCAAACGAGACCGAGAGAGCTGCAGCCGAGAAAGCTTTGGTTAGTTCAAGTCAGCGGGTGTCAACCATTGCTAAAGACTTGGGTGAATTGTCTGATCGTTGGAATTTCATTGATACCTACATGAGTTCATCAAATGATGGGCTTGTGATTGGGAAGAATGATGGTAGCTCTAGCATTATGTTCAACCCTAACGGTCGCATTTCAATGTATTCGGCAGGGTCTGAAGTCATGTATATTTCGCAAGGTGTAATACACATCGAGAACGGGATCTTCTCGAAAACTATCCAAGTTGGTCGATATCGTGAGGAACAGTACCATCTTAACCCAGACATGAATGTCATTCGTTATGTAGGAGGTTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
044bdc6f1fe45802e88256315eebb7770d40c694e7a2097ab02d1880843c8c4f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7071
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Streptococcus thermophilus bacteriophages and their control in the dairy environment Duarte,V.S., Treu,L., Giaretta,S., Campanaro,S., Vidigal,P.M.P., Tarrah,A., Corich,V. and Giacomini,A. 2018-03-08 — GenBank