Protein

Genbank accession
QDH45315.1 [GenBank]
Protein name
tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MTDITANVVVSNPRPIFTESRSFKAVANGKIYIGQIDTDPVNPANQIPVYIENEDGSHVQITQPLIINAAGKIVYNGQLVKIVTVQGHSMAIYDANGSQVDYIANVLKYDPDQYSIEADKKFKYSVKLSDYPTLQDAASAAVDGLLIDRDYNFYGGETVDFGGKVLTIECKAKFIGDGNLIFTKLGKGSRIAGVFMESTTTPWVIKPWTDDNQWLTDAAAVVATLKQSKTDGYQPTVSDYVKFPGIETLLPPNAKGQNITSTLEIRECIGVEVHRASGLMAGFLFRGCHFCKMVDANNPSGGKDGIITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACRVNGLRLIGIRSTDGQGLTIDAPNSTVSGITGMVDPSRINVANLAEEGLGNIRANSFGYDSAAIKLRIHKLSKTLDSGALYSHINGGAGSGSAYTQLTAISGSTPDAVSLKVNHKDCRGAEIPFVPDIASDDFIKDSSCFLPYWENNSTSLKALVKKPNGELVRLTLATL
Physico‐chemical
properties
protein length:667 AA
molecular weight: 71855,98720 Da
isoelectric point:5,33857
aromaticity:0,08846
hydropathy:-0,16432

Domains

Domains [InterPro]
IPR009093
1–113
IPR009093 IPR011050
IPR036730
2–110
IPR036730 G3DSA:2.160.20.20:FF:000002
G3DSA:2.170.14.10:FF:000001
2–110
G3DSA:2.170.14.10:FF:000001 IPR012332
IPR036730
7–109
IPR036730 IPR015331
QDH45315.1
1 667
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SF11
[NCBI] 		2575331 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH45315.1 [NCBI]
Genbank nucleotide accession
MK770415 [NCBI]
CDS location
range 34723 -> 36726
strand +
CDS
ATGACAGACATCACTGCAAACGTAGTTGTTTCTAACCCTCGTCCAATCTTCACTGAATCCCGTTCGTTTAAAGCTGTTGCTAATGGGAAAATTTACATTGGTCAGATTGATACCGATCCGGTTAATCCTGCCAATCAGATACCCGTATACATTGAAAATGAGGATGGCTCTCACGTCCAGATTACTCAGCCGCTAATTATCAACGCAGCCGGTAAAATCGTATACAACGGCCAACTGGTGAAAATTGTCACCGTTCAGGGTCATAGCATGGCTATCTATGATGCCAATGGTTCTCAGGTTGACTATATTGCTAACGTATTGAAGTACGATCCAGATCAATATTCAATAGAAGCTGATAAAAAATTTAAGTATTCAGTAAAATTATCAGATTATCCAACATTGCAGGATGCAGCATCTGCTGCGGTTGATGGCCTTCTTATCGATCGAGATTATAATTTTTATGGTGGAGAGACAGTTGATTTTGGCGGAAAGGTTCTGACTATAGAATGTAAAGCTAAATTTATAGGAGATGGAAATCTTATTTTTACGAAATTAGGCAAAGGTTCCCGCATTGCCGGGGTTTTTATGGAAAGCACTACAACACCATGGGTTATCAAGCCTTGGACGGATGACAATCAGTGGCTAACGGATGCCGCAGCGGTCGTTGCCACTTTAAAACAATCTAAAACTGATGGGTATCAGCCAACCGTAAGCGATTACGTTAAATTCCCAGGAATAGAAACGTTACTCCCACCTAATGCAAAAGGGCAAAACATAACGTCTACGTTAGAAATTAGAGAATGTATAGGGGTCGAAGTTCATCGGGCTAGCGGTCTAATGGCTGGTTTTTTGTTTAGAGGGTGTCACTTCTGCAAGATGGTAGACGCCAATAATCCAAGCGGAGGTAAAGATGGCATTATAACCTTCGAAAACCTTAGCGGCGATTGGGGGAAGGGTAACTATGTCATTGGCGGACGAACCAGCTATGGGTCAGTAAGTAGCGCCCAGTTTTTACGTAATAATGGTGGCTTTGAACGTGATGGTGGAGTTATTGGGTTTACTTCATATCGCGCTGGGGAGAGTGGCGTTAAAACTTGGCAAGGTACTGTGGGCTCGACAACCTCTCGCAACTATAATCTGCAATTCCGCGACTCGGTCGTTATTTACCCCGTATGGGACGGATTCGATTTAGGTGCTGACACTGACATGAATCCGGAGTTGGACAGGCCAGGGGACTACCCTATAACCCAATACCCACTGCATCAGTTACCCCTAAATCACCTGATTGATAATCTTCTGGTTCGCGGGGCGTTAGGTGTAGGTTTTGGTATGGATGGTAAGGGCATGTATGTGTCTAATATTACCGTAGAAGATTGCGCTGGGTCTGGCGCGTACCTACTCACCCACGAATCAGTATTTACCAATATAGCCATAATTGACACCAATACTAAGGATTTCCAGGCGAATCAGATTTATATATCTGGGGCTTGCCGTGTGAACGGTTTACGTTTAATTGGGATCCGCTCAACCGATGGGCAGGGTCTAACCATAGACGCCCCTAACTCTACCGTAAGCGGTATAACCGGGATGGTAGACCCCTCTAGAATTAATGTTGCTAATTTGGCAGAAGAAGGGTTAGGTAATATCCGCGCTAATAGTTTCGGCTATGATAGCGCAGCGATTAAACTGCGGATTCATAAGTTATCAAAGACATTAGATAGCGGAGCATTGTACTCCCACATTAACGGGGGGGCCGGTTCTGGCTCAGCGTATACTCAACTTACTGCTATTTCAGGTAGCACACCTGACGCTGTATCATTAAAAGTTAACCACAAAGATTGCAGGGGGGCAGAGATACCATTTGTTCCTGACATCGCGTCAGATGATTTTATAAAGGATTCCTCATGTTTTTTGCCATATTGGGAAAATAATTCTACTTCTTTAAAGGCTTTAGTGAAAAAACCCAATGGAGAATTAGTTAGATTAACCTTGGCAACACTTTAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1CLW
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
1LKT
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
1QA1
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
1QA2
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
1QA3
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
1QQ1
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
1QRB
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
1QRC
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
1TSP
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
1TYU
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
1TYV
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
1TYW
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
1TYX
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
2VFM
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
2VFN
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
2VFO
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
2VFP
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
2VFQ
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
2VKY
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
2VNL
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
2XC1
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
3TH0
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
5GAI
PDB
Source PDB
Method EM
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
8EAN
PDB
Source PDB
Method EM
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
8EB7
PDB
Source PDB
Method EM
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
8TVR
PDB
Source PDB
Method EM
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
8U10
PDB
Source PDB
Method EM
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
8U11
PDB
Source PDB
Method EM
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
8U1O
PDB
Source PDB
Method EM
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB
PDB ID
5265ffe282eb1bd1994e9cf6866a200bcce5af28064483c061730d974d9e7dc2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6753
Evidence 0,6753
Download PDB

Literature

Title Authors Date PMID Source
Salmonella bacteriophage diversity and host specificity revealed by physiological characterization and whole genome sequencing Fong,K., Wang,S., Delaquis,P., Tremblay,D., Moineau,S., Levesque,R. and Goodridge,L. 2019-09-14 — GenBank