Protein

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Genbank accession
YP_009802283.1 [GenBank]
Protein name
straight fibre tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MISNNAPAKMVLNSVLTGYTLAYIQHSIYSDYDVIGRSFWLKEGNNITRRDFTGVDTFSVTINNLKPTTTYEVQGAFYDSIIDSELLNAQIGINLSDKQTFRMKSAPRITGARCESEPVDVGVGSPIVYIDTTGEADYCTIELKDNSSADSPWIKYYVGALMPTIMFGGVPIGFYKVRISGQVTLPDGVTVDSSGYFEYPTVFEVKYNFVPPTAPVNIVFKAARIADGKERYDVRVEWDWERGAGANVREFVVSYIDSAEFARSGWTKAQKINVGAAQAATIISFPWKVEHKFKVSSIAWGPDAQDVTDSAVQTFILNESTPLDNSFVNETGIEVNYAHIKGKIKDGSTWKQTFLIDAATGAINIGLLDAEGKAPISFDPIKKIVNVDGSVITKTINAANFVMTNLTGQDNPAIYTQGKTWGDTKSGIWMGMDNATAKPKLDIGNATQYIRYDGDTLRISSGVVIGTPNGDIDIATGIQGKQTVFIYILGTSLPAKPTSPAYPPSGWSKTPPNRTSNTQNIYCSTGTLDPVTNQLVSGTSWSDVVQWSGTEGVDGRPGANGSPGANGQRGPGMYSVAITNLTAWNDSQANSFFTSNFGSGPVKYDVLTEYKSDAPGTAFTRQWNGSAWASPAMVLHGDMIVNGTVTASKIVANNAFLSQIGVNIIYDRAAALSSNPEGSYKMKIDLQNGYIHIR
Physico‐chemical
properties
protein length:694 AA
molecular weight: 75117,39570 Da
isoelectric point:5,31617
aromaticity:0,10231
hydropathy:-0,20043

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
104–196
IPR057551
YP_009802283.1
1 694
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-196 | STR 211-335 | STR 350-673 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009802283.1
1 694
Domain Start End Length (AA) Confidence
N-terminal 1 409 409 0,8552
Central domain 410 659 251 0,1869
C-terminal 660 694 34 0,9036
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-409
Central
410-659
C-terminal
660-694

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Gostya9
[NCBI] 		2182345 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus gostya9
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009802283.1 [NCBI]
Genbank nucleotide accession
NC_047979 [NCBI]
CDS location
range 77594 -> 79678
strand -
CDS
ATGATTTCAAATAATGCACCAGCCAAGATGGTCTTAAATAGCGTACTGACTGGATATACCTTAGCGTATATCCAGCACTCCATTTACTCGGATTACGACGTTATTGGTAGATCCTTCTGGCTTAAAGAAGGTAACAACATCACTCGTAGGGATTTTACTGGTGTTGATACATTCTCTGTAACTATTAATAACTTAAAACCTACGACAACTTATGAAGTTCAGGGTGCATTTTATGATTCTATAATAGACTCTGAACTACTTAATGCTCAGATAGGTATTAATTTATCTGACAAACAAACTTTTAGAATGAAATCAGCACCTAGAATCACGGGTGCTCGATGCGAGTCAGAACCGGTGGACGTTGGTGTTGGTTCTCCAATAGTTTATATAGATACTACCGGGGAGGCCGATTATTGTACTATAGAGTTAAAAGATAATTCTAGTGCAGATAGTCCTTGGATTAAATATTACGTGGGTGCTTTGATGCCAACTATTATGTTTGGTGGAGTACCTATTGGATTCTATAAAGTAAGGATCTCAGGACAAGTAACCCTACCTGACGGGGTAACAGTTGATTCCTCAGGGTATTTTGAGTATCCTACCGTCTTTGAAGTTAAATATAACTTTGTGCCTCCTACAGCTCCTGTTAATATCGTGTTTAAAGCTGCACGAATTGCAGATGGTAAGGAACGATATGATGTTAGAGTAGAATGGGACTGGGAACGTGGTGCTGGTGCTAACGTTAGAGAGTTTGTTGTTTCTTATATAGACTCAGCAGAGTTCGCACGTAGTGGTTGGACTAAAGCTCAAAAGATTAACGTTGGTGCTGCTCAAGCTGCAACAATTATCTCATTCCCGTGGAAAGTAGAACATAAATTTAAAGTGTCATCTATTGCCTGGGGACCAGATGCCCAAGATGTTACTGATTCCGCAGTACAGACATTTATATTAAATGAGAGTACTCCACTAGATAATAGTTTTGTTAATGAAACTGGTATCGAAGTAAATTACGCGCACATTAAGGGTAAAATTAAAGATGGATCGACCTGGAAACAAACCTTCTTAATAGATGCTGCCACCGGTGCTATTAATATAGGTCTTCTAGATGCAGAAGGAAAAGCACCAATATCTTTTGACCCTATTAAAAAGATAGTTAACGTTGATGGAAGTGTAATAACTAAAACCATTAATGCTGCGAACTTTGTAATGACTAACTTAACTGGTCAAGACAACCCAGCAATCTATACTCAAGGCAAAACTTGGGGAGACACAAAATCCGGCATTTGGATGGGCATGGATAACGCTACTGCTAAACCAAAACTGGACATTGGTAATGCTACACAGTACATTCGTTATGATGGGGATACGTTAAGAATCTCTAGTGGGGTTGTAATTGGTACACCTAACGGTGACATCGATATAGCAACAGGTATACAAGGTAAGCAGACAGTATTTATCTATATTCTAGGTACTTCATTGCCTGCTAAACCAACAAGTCCTGCATACCCACCTTCAGGTTGGTCTAAAACTCCACCGAATAGAACATCTAATACTCAGAATATTTATTGTTCTACTGGTACTTTAGACCCTGTTACTAATCAGTTAGTATCTGGAACCAGTTGGTCAGATGTAGTTCAATGGAGTGGTACAGAAGGGGTTGATGGTAGGCCAGGGGCCAATGGTAGTCCAGGTGCTAATGGACAACGTGGTCCCGGTATGTACTCCGTTGCTATTACTAATTTAACGGCATGGAATGATTCTCAAGCCAATTCGTTTTTTACATCTAACTTCGGTAGTGGCCCTGTTAAGTATGATGTATTGACTGAGTATAAAAGTGATGCACCTGGAACAGCGTTTACTAGGCAGTGGAATGGTTCAGCATGGGCTAGCCCTGCAATGGTTTTACATGGTGATATGATAGTTAATGGTACGGTAACTGCTAGTAAAATTGTTGCTAATAATGCTTTCTTATCACAAATAGGTGTAAATATTATATATGATCGTGCAGCAGCACTATCCTCTAACCCAGAGGGATCTTACAAAATGAAGATAGACCTGCAAAACGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bddc4245b94061aed532539c39d5d8f12113a8c8fe4edaacbc6388eafa6b94c5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7872
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Looking for novel host receptors of T5-like bacteriophages Kulikov,E.E., Letarov,A.V. and Golomidova,A.K. 2019-11 — GenBank