Protein

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Genbank accession
AZF94830.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MSLVQLIDSTVGLRNELTQPDGAYLTGLGASTVGALLDTTRKLSYYGNNRQALIDLLLHAKVTGGPIDIDVPVLIDTPINMDFEYTPLIMSCSSGRLLSDTTALVLNRLGYGSTINNFDMWNVTAPWAITRWGSTGDWNTSEEAVASLIQTNDLHYYQPTVNDADVWSALTPEQQNQNISPKLEVHNSDGVVLNTPRGRYALYEFYGCNYCRVFNPNLSGGKGVLGTIVFNNTNATAYGIDNWVVGGDDIRNGSFSGVVHLRNKRGGAINCSPYRSGESGIKTYQNELNGVSARCYEMTYTNCHVKQACYDGLDLASDYGAETGRIDDTSLDDAPWHELPTKHTISNCSGTGCQGNALHIDGTGNSITGLKAGFSGLSGIYDDGVNNIYMNIISVNNALDNISHQITIPKRNIISSVTLILEASESVTYGYGLYSPLSAISGLDTSLIESGTVVPYIIKAQIATGGDLTVGHPAASDRIARLLLDPEYKSSAGFIGVIAARATGAPAGAPTGDVYINARYLGSEVPGFQVLGVNGGGGLVSTLNSAFATQVGNSQAAFVFNGSSLSIVARDAAGVLRGYALTGVPL
Physico‐chemical
properties
protein length:586 AA
molecular weight: 62124,69300 Da
isoelectric point:4,90278
aromaticity:0,08020
hydropathy:-0,04608

Domains

Domains [InterPro]
IPR012332
STR
39–581
IPR012332
IPR012332
STR
40–581
IPR012332
IPR015331
RBD
79–446
IPR015331
IPR011050
STR
81–443
IPR011050
AZF94830.1
1 586
Architecture
STR
STR 39-581 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZF94830.1
1 586
Domain Start End Length (AA) Confidence
N-terminal 1 50 50 0,9871
Central domain 51 464 415 0,9866
C-terminal 465 586 121 0,9439
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-50
Central
51-464
C-terminal
465-586

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage Nobby_B3
[NCBI] 		2489632 Uroviricota > Caudoviricetes > Autographivirales > Corkvirinae > Phimunavirus
Host Pectobacterium atrosepticum
[NCBI] 		29471 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
fcf8a7437993e73ffc754274244cb513dc303b48f141cebe846c4305d4858025
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6192
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50