Protein

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Genbank accession
AGG54641.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAITYTDNGGGAPNGSDLEFTYTFPIIQTEDVKVALNGVTQATTKYAVDNVSNPTKITFNNTSVDSSVQETSGAPKSGVTVRVYRETTVGKANGDEDPKAVFAAGSSIRATDLNANQEQALFAIHELQSQPVLAEQIDTGAITSDKILDGTIATADIADSAITTAKINADAVNGTKIADDSINSEHYVDGSIDTAHIADSQITSAKIADGTIVSGDIANNAVITDKLNNLAVTTAKVADGAITSAKLASGTVATGDIAADAITSAKIADDQINSEHYVDGSIDTAHIADSQITSAKIADGTIVAGDLASNAVTTAKITDSNVTTAKIADSNVTTAKIAADAITGAKIADDQINSEHYVDGSIDTAHIADSQVTTAKIADANVTSAKIASNAVTTDKIADGELTTLAGMQSTTASNLASGTALTATTTELNQLDGITLETSVTTNSDTRIPTSKAVNDLVLSVTNALGGFVAIANETSFPTANPDPSNNAGTVVSISQLASGLAVNGSGVATISNGAGTGNTVTITGFPSSLVSQTLPATSGLQVQTTSTLHTYTFHKQLASAADIQAISATVNSFSNRYRVSASAPTSSLDGGDLWYDTTNSKLMVYSSQNSAWEESSAIGNFFISTISSSSNTGGGSATPNGTAYRFTISDAPVSAQQLLVSVDGVIQKPNSGTSQPSEGFALSGNDIIFGSAPANGASLFVTVIGSTVGIGTPSNNTVTTAILQNGSVTTAKIVDANVTTAKITDANVTTAKIADDAVTAAKLASSAVVTASIVDANVTTAKIADDAVTAAKLANTSVSAGSYGSSTSIPSITVDAQGRITAASGNSVNFDVVADTSPQLGGDLYANGNQIYIEDSTGSNHNRLKFGNSSDLQIYHDNNSKIHGSSGYTQLSAQNGSVYIDGNTIFLRSGDGSETYAKFVDDGKVELRFDDSIKFDTTSEGAAIYDSDGDSRLTFFTNGSSNRGSVYASSDSSVGFLNSSGSWSCRVDNNKSVHFYNHAYPQANNSYDLGSTSLRWRNIYTNDLHLSNEGSSNDVDGTWGDWTIQEGESDLFLKNNRSGKKYKFNLTEVS
Physico‐chemical
properties
protein length:1072 AA
molecular weight: 110231,56330 Da
isoelectric point:4,43534
aromaticity:0,05597
hydropathy:-0,16483

Domains

Domains [InterPro]
DC_1194
STR
2–229
DC_1194 DC_1335 DC_1194
IPR053336
Unmapped
257–398
IPR053336
DC_1335
ATT
330–681
DC_1335
AGG54641.1
1 1072
Architecture
STR
ATT
STR
STR 2-229 | ATT 247-681 | STR 694-1072
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGG54641.1
1 1072
Domain Start End Length (AA) Confidence
N-terminal 1 476 476 0,9490
Central domain 477 794 319 0,0926
C-terminal 795 1072 277 0,8740
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-476
Central
477-794
C-terminal
795-1072

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-GSP1
[NCBI] 		382262 Uroviricota > Caudoviricetes > Autographivirales > Lingvirus PGSP1 >
Host Prochlorococcus marinus subsp. pastoris str. CCMP1986
[NCBI] 		59919 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
84296f77e754523f6a7a0c4ae635ef4b4c0ae0799f23dc1056c8e50c311ce871
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5727
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50