Protein
View in Explore- Genbank accession
- AKU42648.1 [GenBank]
- Protein name
- tail fiber protein
- RBP type
-
TF
- Protein sequence
-
MILYITSHKDGRLLGSCDAAMDIKQDGRFVVPPYYTPAQPPGDFLGDDECWAYLDDGGQPVREYNNGSWVKKKKQVEVTAYHKQTHQAKEFDDRSLVADEYTLNEPPTPYHDFVDNDWLANKEKAANAKRAEINNWRKQMENNESQIVSAIGFDWDAGPSARLRIDSALLNGVAPQYWTDANNVDHEGMTLEELKQVRVAISELGFATHDRQRTMKKEVETLTNFDEILNYPVGWPEE
- Physico‐chemical
properties -
protein length: 238 AA molecular weight: 27210,83230 Da isoelectric point: 4,81645 aromaticity: 0,10084 hydropathy: -0,79244
Domains
Domains [InterPro]
DC_2197
STR
19–238
STR
19–238
Coil
Unmapped
119–146
Unmapped
119–146
IPR025484
STR
125–221
STR
125–221
1
238
Architecture
STR 19-238
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Vibrio phage H188 [NCBI] |
1673892 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Vibrio kanaloae [NCBI] |
170673 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AKU42648.1
[NCBI]
Genbank nucleotide accession
KT160311.1
[NCBI]
CDS location
range 44974 -> 45690
strand -
strand -
CDS
ATGATTTTATACATTACATCACACAAAGATGGTAGGTTGCTTGGGAGTTGTGATGCTGCGATGGATATCAAGCAGGATGGTCGCTTTGTTGTTCCTCCTTATTACACGCCAGCTCAACCGCCTGGTGATTTCTTGGGTGATGATGAATGCTGGGCTTATCTAGATGATGGTGGTCAACCAGTTCGAGAGTACAATAATGGCTCGTGGGTTAAAAAAAAGAAACAAGTTGAAGTAACTGCTTACCATAAGCAAACTCATCAAGCTAAAGAGTTTGATGATAGGTCTTTGGTAGCTGATGAATACACGCTTAATGAACCACCAACACCCTATCATGACTTTGTTGATAATGATTGGCTTGCTAACAAAGAAAAAGCAGCGAACGCAAAGCGTGCAGAGATAAACAATTGGCGCAAGCAGATGGAAAATAACGAGAGTCAAATCGTTAGCGCGATTGGATTTGATTGGGACGCTGGGCCTAGCGCTCGTTTGCGCATCGATTCAGCGCTATTGAATGGTGTTGCACCTCAATACTGGACCGATGCGAACAATGTAGATCATGAAGGTATGACACTTGAAGAGTTGAAACAGGTGAGAGTTGCTATTAGTGAACTTGGTTTTGCCACCCACGATAGACAACGTACGATGAAGAAAGAAGTGGAAACACTAACAAACTTCGATGAGATTCTTAACTATCCAGTTGGTTGGCCTGAAGAGTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
3a9bbb9f3efb302cd9f35c3cb770494fd554a85e8c236d08c3e29b102281eed7
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50