Protein

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Genbank accession
XYL04354.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAHQKGTATNYKDFLSKLRTFATANGWTQKRWSNPASGEHELILQSVGDSGSDAITLAWATHTNADTDIHNIRCKVGNTFVDNPFDTLVNTNSETVVYLWNGSIDYHIMVNKERIMFACAVSGTAQYYYGGNFRTYTSKGHWVNPLCCFGVGTNKDGRWSSTGDDYSGWQYVRGTKATPVYNHEKVWKKMSLIHPFMDTTNYHRYIEYANGDRALLQAIIQVEGMQVAGELIGVFGTGGIGLSNFQELVHSNGRRYVVVQNVYRASAGDYLVMEMS
Physico‐chemical
properties
protein length:276 AA
molecular weight: 30920,25700 Da
isoelectric point:7,14264
aromaticity:0,12319
hydropathy:-0,37609

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYL04354.1
1 276
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0594
Central domain 11 209 200 0,0025
C-terminal 210 276 66 0,9991
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-276

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_Va_ZWPVA056
[NCBI] 		3451608 Viruses >
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYL04354.1 [NCBI]
Genbank nucleotide accession
PV871617 [NCBI]
CDS location
range 47656 -> 48486
strand -
CDS
ATGGCACACCAGAAAGGTACAGCCACCAACTATAAGGACTTCTTATCTAAGCTCCGCACGTTCGCTACGGCGAACGGGTGGACCCAGAAGAGATGGAGCAATCCAGCTAGTGGTGAGCATGAATTAATCCTACAGTCTGTGGGAGACTCAGGTAGTGACGCTATTACGTTGGCGTGGGCAACGCACACCAACGCGGATACTGATATTCACAACATTCGATGTAAGGTAGGGAATACCTTCGTGGATAACCCGTTCGACACATTAGTAAATACGAACTCAGAGACGGTTGTGTACTTATGGAACGGGTCAATTGACTACCACATCATGGTCAACAAAGAGCGGATCATGTTCGCGTGCGCTGTATCCGGTACGGCGCAGTACTATTATGGTGGCAACTTCCGAACATACACCTCTAAAGGGCACTGGGTAAACCCGCTATGCTGTTTTGGGGTGGGTACTAACAAGGATGGTCGCTGGTCTAGCACTGGCGATGACTACTCTGGCTGGCAGTACGTACGTGGTACTAAGGCTACTCCAGTGTATAACCATGAGAAAGTGTGGAAGAAGATGTCACTAATCCACCCTTTCATGGATACCACTAACTACCACAGGTACATAGAGTACGCCAATGGGGATCGCGCACTACTCCAAGCAATCATTCAGGTTGAGGGTATGCAAGTAGCGGGTGAGCTTATCGGTGTGTTCGGGACTGGTGGTATCGGGCTGTCGAACTTCCAAGAGCTGGTACATAGTAATGGTAGAAGATATGTTGTAGTGCAGAATGTGTACCGGGCGTCTGCTGGCGATTATTTAGTAATGGAGATGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
26306644285500f3774f028c475c23adaedde126f85693f3237709a8d192937a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9153
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50