Protein

View in Explore
Genbank accession
XPK43433.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,67
Protein sequence
MPVIHVQKMPGTPKETGIVPAGTNLWKWLNKSNLPASISIAVNGRVLGEDDELSFCLRDGDVVNVYCQPSGAIGDLIGAILKPVTKIFSFLTPKVSTPKTDTSSKTSPNTSLKAQTNIARNGEARPDNFGQIRAFPDLLQESLFEYINNIKYVTEFMNFGLGKYDVSSVRYSESNLGSLAGASYTIYQPGEVIPVVYEPYAFDDVDGQELYGPNELDTNPPPVVIETATTTTVTETEFAGGQIAVKIPKNSAFDYFVDLAMPHDVVFKLNITYAQGGGASVTENVTLSGRLVSATETDDGGLPPVNYWYTFIINSINYSGAPISSLNGVTINNTYFNLTDNQPIVSGPYFSPIEGDQLWVHISHQAGEDARPTALIEWWKLDDDNNQVPGTYQSYNFDGGEAPRQDTFYWTLKFSPSGGTGRYAVQLRRTNNSNSMSIMQVEEIHSIVTRTNVSYPDDTVVKVIVRATENATGSRDRKYNALITRHTIGYNRDAGTVRYTLAPSRSFADAVLHNWLITAGNPENTIDIVKLYEIADSLPDERLGYFDYTFDDEDKSIGERLQTICDAARVTAFWDDGVMSFSRDEKREYPATVFNTRNTQSDGYKLSYDISLPGTYDGVNVEYRDPTTNKQANVYYRITDSGIVEGEPTKAKKFDMLYVRNRYQAVDRAILECRRLIYSRRSMEIKALADGEWVNVGDMIQVVDMYDDVQQTGVIEARNGNIFTTSEQLTADDNLYVVITSSDGSVSDRLPATITGLHTFTCNLPSDFQLNIWDGTNVQSESRYVLSTEKELDTTLWVVSQKNPGSDGTTTLTMSEYSDDMYEYTIPSS
Physico‐chemical
properties
protein length:829 AA
molecular weight: 92159,27230 Da
isoelectric point:4,60131
aromaticity:0,10253
hydropathy:-0,38999

Domains

Domains [InterPro]
DC_0118
STR
1–671
DC_0118 DC_0808
NF040662
Unmapped
355–823
NF040662
XPK43433.1
1 829
Architecture
STR
RBD
STR 1-671 | RBD 687-828 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SusanneMuster_Bas79
[NCBI] 		3398436 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK43433.1 [NCBI]
Genbank nucleotide accession
PQ850629 [NCBI]
CDS location
range 30502 -> 32991
strand +
CDS
ATGCCAGTAATTCATGTTCAGAAGATGCCGGGCACACCGAAAGAAACGGGGATTGTGCCAGCGGGTACAAACCTGTGGAAGTGGCTGAATAAATCAAATCTTCCTGCCAGCATTTCAATTGCGGTAAATGGCAGAGTGCTTGGTGAAGATGATGAGCTTTCCTTCTGCTTGCGTGATGGCGATGTAGTTAATGTTTATTGCCAGCCGTCCGGCGCAATCGGCGACCTTATCGGCGCGATACTGAAGCCAGTAACGAAGATTTTCTCTTTTCTTACACCAAAAGTATCCACGCCGAAAACGGATACCAGCTCCAAAACATCACCGAATACCAGCCTAAAGGCGCAAACCAACATTGCGCGAAATGGCGAGGCGCGCCCTGATAACTTCGGGCAGATTCGTGCATTCCCTGATTTGCTTCAGGAATCATTATTTGAATACATCAACAATATTAAATATGTCACAGAGTTCATGAATTTTGGCCTCGGTAAATATGATGTATCATCCGTGCGTTATTCTGAGTCAAACCTCGGTTCACTGGCTGGCGCGAGTTACACCATCTATCAGCCTGGAGAAGTTATTCCGGTTGTGTATGAGCCTTATGCATTTGATGATGTTGATGGGCAGGAGCTTTACGGGCCAAACGAACTGGATACTAACCCACCACCAGTAGTCATTGAAACTGCGACAACAACCACGGTTACAGAAACAGAATTTGCTGGTGGTCAGATTGCTGTCAAAATACCGAAAAACTCAGCATTCGATTACTTCGTTGACCTGGCCATGCCTCATGACGTGGTGTTCAAACTGAATATCACTTACGCGCAGGGGGGTGGTGCATCTGTCACCGAAAACGTTACGCTATCAGGAAGACTTGTATCTGCAACCGAGACTGATGATGGTGGTTTGCCGCCAGTAAACTACTGGTACACATTTATTATTAACAGCATCAACTACTCAGGCGCGCCAATATCATCATTGAACGGCGTGACGATTAACAACACCTATTTCAACCTAACTGACAACCAACCAATCGTTTCTGGTCCTTACTTTTCGCCAATTGAAGGTGATCAGTTATGGGTGCATATATCACACCAGGCCGGAGAGGATGCTAGGCCAACCGCACTTATTGAATGGTGGAAACTGGACGATGACAACAATCAGGTTCCGGGAACTTATCAGTCCTACAACTTTGATGGTGGCGAGGCACCACGGCAGGATACTTTTTACTGGACGTTAAAGTTCTCCCCATCAGGAGGAACTGGTCGCTATGCTGTGCAGTTACGAAGAACAAACAACAGCAACAGCATGTCAATCATGCAGGTTGAGGAAATCCACTCAATCGTCACTCGCACCAACGTTTCGTATCCAGATGACACCGTGGTTAAGGTTATCGTGCGAGCAACAGAGAACGCCACAGGCAGTCGTGACAGGAAATATAATGCGTTAATCACACGTCACACCATCGGATATAACCGAGATGCTGGCACCGTGCGCTACACGCTAGCACCTTCTCGCAGTTTTGCTGATGCTGTGCTGCATAACTGGCTGATTACCGCTGGCAATCCAGAAAATACCATCGACATAGTGAAGCTGTATGAAATTGCCGACAGCCTGCCTGATGAGCGTCTTGGTTATTTCGATTACACGTTTGACGATGAGGATAAGAGTATCGGCGAACGCCTGCAGACCATCTGCGATGCCGCGCGCGTCACTGCATTCTGGGATGACGGTGTGATGAGCTTCTCGCGTGATGAAAAACGAGAATATCCGGCAACTGTATTCAATACCAGAAACACACAGAGCGACGGCTATAAGCTGAGTTATGACATCAGTCTTCCAGGCACTTACGATGGCGTTAACGTTGAATATCGTGACCCAACAACGAACAAGCAGGCCAACGTTTACTATCGAATTACCGATAGCGGAATAGTCGAAGGGGAACCAACGAAAGCCAAGAAGTTCGACATGCTTTATGTTCGCAATCGCTATCAGGCTGTTGACCGCGCAATCCTTGAGTGTCGCCGACTTATTTATTCACGCCGTAGCATGGAAATTAAAGCGCTGGCAGATGGCGAATGGGTTAACGTAGGCGACATGATTCAGGTTGTCGATATGTATGATGATGTGCAACAGACTGGCGTTATTGAAGCGCGTAACGGGAACATATTCACAACCAGCGAGCAACTCACGGCAGATGATAATCTCTACGTTGTGATTACCAGTTCTGACGGCAGCGTGTCAGACAGATTGCCAGCAACAATAACAGGATTGCATACATTCACCTGCAACCTGCCATCTGATTTTCAGTTAAATATTTGGGACGGAACAAACGTACAATCCGAATCTCGTTACGTACTGAGCACGGAGAAGGAACTTGATACTACTTTATGGGTTGTCAGTCAGAAGAATCCAGGCAGTGATGGAACAACAACGCTGACGATGAGTGAATACTCTGATGATATGTACGAATATACCATCCCGTCATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
460bc0f0ad70147310f7873c578a771c00b4c7d71ddec44c819e04504d693ee1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3142
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank