Protein

View in Explore

Genbank accession

QFG05760.1 [GenBank]

Protein name

tail spike

RBP type

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,95

Protein sequence

MNTKTYELECDRWGISPDGTNPTETTKGFNDALNYAAAEGYREIYIPKGVYKIDCVSNFGSRPEYGGGIRNPSNLDVDMHPEATFLVLENDAVGYSLFYINLAENITMKGGRIIGDRYKHTYTYYEEKTKTHEWGYGIHIRGSKNINIENVFVSDCTGDNIWIAANGMMNYAGSTYITARDVTIKKCTLMRGRRNCLATNGCEGLLVDDCTIEEAGGVGGTRPEYGIDLEGFGENGIKYDHPYKLIIRNCRIKNNGLGAISSFTAGKVIIEGNEVDDVISYGYSTDVTITNNQIINEGEIKPYGIDSLGVSSTETGNRVSIKGNTIRGFNIGINAKGKGILVSKNTIEDVESIGIQVYQATSSLVIGNRIDADCTHIKMLYAKKTTVIGNESEGNTDNFAYQVTYSERTVFSGNTLYDGDGGLSVGNSTLTKFKGNTLFITGENYGVHWDASSDLEVSDNTFHMGSGVAIMGYADLYTNIIKDNVIHDSKATYAIYLKGGSFHAVERNTVKVARNADFGYGIYIEGTTGVRMTGNDVAVTNGRDLTAPITTEKSVGTLVDGNKYNRKQIKTHESDIVGQNFYVA

Physico‐chemical properties

protein length:	584 AA
molecular weight:	63867,48880 Da
isoelectric point:	5,32083
aromaticity:	0,09418
hydropathy:	-0,36507

Domains

Domains [InterPro]

IPR012334
STR
12–216

IPR012334 IPR012334 IPR012334

IPR012334
STR
12–230

IPR012334 DC_0453 IPR011050

IPR011050
STR
20–299

IPR011050 IPR006626 IPR006626 DC_0453

IPR051550
Unmapped
30–538

IPR051550

IPR006626
Unmapped
103–142

IPR006626 IPR006626 IPR006626 IPR006626 IPR011050 IPR006626 IPR006626 IPR006626

IPR039448
ENZ
180–298

IPR039448 IPR006626 IPR006626

IPR006626
Unmapped
242–264

IPR006626 IPR006626 IPR007742

QFG05760.1

1 584

Architecture

STR

STR 12-582 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR012334	STR	IPR012334	12	216	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR012334	STR	IPR012334	12	230	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	20	299	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR051550	Unmapped	-	30	538	InterPro	SCF Complex Subunits and Alginate Epimerases	-	-	-	-
IPR006626	Unmapped	-	103	142	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	143	165	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	179	201	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR039448	ENZ	DC_0799	180	298	InterPro cluster	Right handed beta helix domain	C-terminal	High	Text match	178 proteins / 183 hits
IPR006626	Unmapped	-	202	231	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR012334	STR	IPR012334	223	402	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
DC_0453	RBD	DC_0453	230	373	Novel HMM	DC_0453	C-terminal	Low	Positional only	102 proteins / 102 hits
IPR011050	STR	IPR011050	241	436	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR006626	Unmapped	-	242	264	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	284	309	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	316	336	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	337	359	InterPro	Parallel beta-helix repeat	-	-	-	-
DC_0453	RBD	DC_0453	368	582	Novel HMM	DC_0453	C-terminal	Low	Positional only	102 proteins / 102 hits
IPR011050	STR	IPR011050	380	546	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR006626	Unmapped	-	382	405	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR007742	CBM	DC_0096	389	575	InterPro cluster	Periplasmic copper-binding protein NosD-like, beta helix domain	C-terminal	High	Text match	28 proteins / 31 hits
IPR012334	STR	IPR012334	403	577	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR006626	Unmapped	-	406	427	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	452	472	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	476	499	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	500	526	InterPro	Parallel beta-helix repeat	-	-	-	-

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

QFG05760.1

1 584

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	19	19	0,9044
Central domain	20	573	555	0,9970
C-terminal	574	584	10	0,3944

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-19

Central
20-573

C-terminal
574-584

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Bacillus phage 055SW001 [NCBI]	2601662	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

Genbank protein accession

QFG05760.1 [NCBI]

Genbank nucleotide accession

MN176229.1 [NCBI]

CDS location

range 6833 -> 8587
strand -

CDS

ATGAATACCAAAACATACGAATTAGAATGTGACCGTTGGGGAATCTCCCCTGACGGCACTAACCCAACCGAAACGACCAAAGGTTTTAACGATGCCTTGAACTATGCGGCGGCTGAAGGGTACAGGGAAATATACATCCCTAAAGGCGTGTATAAAATTGATTGCGTCAGCAACTTTGGCAGTAGACCTGAATATGGCGGCGGCATTAGGAATCCTTCCAACTTAGACGTGGACATGCACCCTGAAGCTACATTCCTTGTGCTTGAAAATGACGCTGTAGGATACTCACTCTTTTATATCAACCTCGCTGAGAACATCACCATGAAGGGCGGCAGAATTATAGGCGACCGCTACAAACACACATACACCTACTACGAAGAAAAGACCAAAACACACGAGTGGGGTTACGGAATACACATTCGTGGCTCAAAGAATATCAACATCGAGAACGTGTTTGTCTCCGACTGTACAGGGGATAACATATGGATAGCCGCAAACGGCATGATGAACTATGCAGGCAGTACCTACATCACCGCTAGAGACGTGACAATCAAAAAGTGTACCCTTATGAGGGGGCGCAGGAATTGCCTTGCCACTAACGGCTGTGAAGGTTTGCTTGTAGATGACTGCACCATTGAGGAAGCGGGTGGCGTAGGCGGAACTCGACCTGAATACGGCATAGACCTAGAAGGGTTCGGGGAAAATGGCATTAAATACGACCATCCTTACAAGTTGATCATTCGGAACTGCCGAATCAAGAACAACGGTCTAGGCGCTATCAGTTCATTTACGGCAGGAAAGGTCATCATCGAGGGCAACGAAGTCGATGACGTTATCAGCTATGGCTACAGTACAGATGTAACCATCACCAACAATCAGATCATAAATGAGGGTGAAATAAAGCCATACGGTATAGACTCGTTAGGTGTGTCCAGTACGGAGACAGGTAACAGGGTTAGTATCAAGGGTAACACTATTCGAGGATTCAATATCGGCATAAATGCCAAAGGTAAGGGTATCCTCGTATCTAAAAACACGATTGAAGACGTTGAATCCATCGGCATTCAGGTTTATCAGGCTACTAGTTCGCTAGTAATAGGCAACCGCATTGACGCAGACTGCACACACATCAAAATGCTTTACGCCAAGAAGACTACGGTCATCGGTAATGAGTCTGAAGGGAACACAGACAACTTCGCTTATCAGGTAACATACTCAGAGCGGACAGTCTTCAGCGGAAATACACTTTATGATGGTGACGGAGGGTTGAGTGTAGGGAATTCAACGTTGACCAAGTTCAAAGGGAACACCCTTTTCATCACTGGCGAAAATTACGGCGTACATTGGGATGCTTCGTCTGATTTGGAAGTCTCAGATAATACGTTCCACATGGGTAGCGGCGTTGCTATCATGGGTTATGCTGACCTGTACACGAACATCATCAAAGACAACGTCATTCACGATTCAAAAGCGACATATGCGATATACTTGAAAGGCGGCTCTTTCCACGCTGTGGAGCGGAACACGGTCAAGGTAGCCCGTAACGCTGACTTTGGATATGGAATCTACATCGAGGGCACAACGGGTGTCAGGATGACAGGTAATGATGTGGCTGTCACTAACGGCAGGGACTTGACAGCACCTATCACGACCGAAAAGTCTGTGGGCACTCTTGTAGACGGCAATAAATACAACCGCAAACAGATTAAAACACACGAAAGTGACATAGTGGGACAAAACTTCTATGTTGCATAA

Genome Context

Tertiary structure

PDB ID

e39509f03413404a2282f24f944c230d34c22d576f22b9c7873d5173771a76f5

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,8958

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence