Protein
View in Explore- UniProt accession
- A0A1L7N0W2 [UniProt]
- Protein name
- Virion structural protein
- RBP type
-
TSP
- Protein sequence
-
MTLPATTPSITPGAYGSAQNVSFTFRADVTQVAITLNGAPPSISKYIAYDTLTPPNPFIAVTEDGNGRVVYDGGFPKFYNSANPASPASFSALTPAGKYLYNALNWVANPTKVAAGNKKVLFLGDDIVTGNYPIKSTGSSGFYNTINAICSVAGFTPTIKDSNDYGGTLNPTLSEMEQYACVVFISSSWSTVSKITAQACTDVATYRQNGNGVVVITDHGYNLNTIADISTADPAFFKTANAIVSKFGTYFTGNYDRTPVQVGFLRTTYGDHPLYAGMADTDYVAAGASESRVVAPSATTYAPGSVPSQNVSANGLNTINVLALTSDGSMYSDKFVYNIQGTEFVFAKSTNPSSGLLETNGGKAWADWGGKVDLSMSLDGSNLGTVWGEILLNGKRIGEVYYSGGQSYTYWYAGAANRTPMRKNDTVQQAIAIPFSYTKSLTIVRPEFDAESGHVSLSSKYKSYRDMIGDLPLRNGLTMVFNTMKGYVAPSAQQQLKSVSMQVAYFENLMQGKLQTSDSLTAAIYATSTACATAVAAAAANPGTVLIDAQTSKVYAYKSGSIQEIVGLKPHDFFGSPRVVTSTVGGTYRLETNGAITKLT
- Physico‐chemical
properties -
protein length: 600 AA molecular weight: 63673,56580 Da isoelectric point: 6,89545 aromaticity: 0,10833 hydropathy: -0,09533
Domains
Domains [InterPro]
No domain annotations available.
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
600
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 11 | 11 | 0,4827 |
| Central domain | 12 | 497 | 487 | 0,8301 |
| C-terminal | 498 | 600 | 102 | 0,7547 |
Note: Constraints were applied during segmentation.
Fixed 24 C-terminal predictions appearing before Central domain|Sequence started with non-N-terminal domain
Fixed 24 C-terminal predictions appearing before Central domain|Sequence started with non-N-terminal domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-11
1-11
Central
12-497
12-497
C-terminal
498-600
498-600
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Ralstonia phage RP12 [NCBI] |
1923889 | Uroviricota > Caudoviricetes > Chimalliviridae > Ripduovirus RP12 > |
| Host |
Ralstonia solanacearum [NCBI] |
305 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales |
Coding sequence (CDS)
Coding sequence (CDS)
No CDS data available.
Genome Context
Genome Context
Tertiary structure
PDB ID
ed2e297a691f928dcc14b949c18ac99da489a5e10f57a136d5c236d6bf659628
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50