Protein

Genbank accession
YP_001700696.1 [GenBank]
Protein name
bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVDGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQASESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAERAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPALTGTPTAPTPETAAAGIEIATAAFVAAKVAQLVGSAPETLDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSGKSVDGLIEYVGLRETINHAADALLKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGATRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTSLNPPPNSYPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHSARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
Physico‐chemical
properties
protein length:812 AA
molecular weight: 81425,00980 Da
isoelectric point:4,80121
aromaticity:0,04557
hydropathy:-0,19557

Domains

Domains [InterPro]
IPR013609
1–134
IPR013609 IPR051934
IPR008969
5–80
IPR008969 Coil IPR005068 SSF88874
G3DSA:2.60.40.1120
5–89
G3DSA:2.60.40.1120 IPR037053
IPR011083
632–679
IPR011083
YP_001700696.1
1 812
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Phage Gifsy-2
[NCBI] 		129862 Viruses >
Host Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
[NCBI] 		99287 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001700696.1 [NCBI]
Genbank nucleotide accession
NC_010393.1 [NCBI]
CDS location
range 38290 -> 40728
strand +
CDS
ATGCCAGTACTTATTTCCGGCGTACTGAAGGATGGTACGGGAACGCCGGTACAGAACTGCACCATTCAGCTGAAGGCCTGCCGGACCAGTACGACGGTGGTCGTGAATACGGTGGCATCAGAAAATCCGGATGACGCCGGGCGCTACAGCATGGATGTGGAGCAGGGGCAGTACACTGTCACGCTCCTGGTGGACGGGTATCCCCCGTCACATGCCGGAGTTATTACGGTTTACGATGATTCAAAGCCGGGCACCCTGAATGATTTTCTGGGGGCCATGACAGAAGACGACGTCCGCCCGGAGGCGCTGCGGCGTTTTGAGGCGATGGTGGAAGAAGTTGCCCGCCAGGCATCGGAGGCATCGCGGAATGCCACCGCCGCAGGGCAGGCATCTGAACAGGCGCAGACATCAGCAGGTCAGGCATCGGAAAGCGCCACGGCAGCAGTGAATGCAGCCGGAGCGGCAGAAGCATCAGCCACACAGGCAGCCTCATCCGCAGCATCTGCGGAGAGCAGCGCAGGTACGGCGACCACAAAAGCCGGGGAGGCATCAGCCAGCGCGGCGTCGGCTGACACAGCCAGAACGGCGGCAGCCGCATCGGCAGCCGCAGCGAAAACATCTGAAGCGAATGCAGATGCCTCCCGTACTGCCGCCGGCGATTCAGCTGCTGCCGCAGCCGCCAGCGCGACGGCGGCGCAGACATCAGCAGAGCGCGCCGGAGCATCCGAAACCGCCGCGAAGACGTCAGAAACGCAGGCGGCTTCCAGTGCCGGTGATGCAGGTGCGTCAGCCACTGCGGCGGCAGCGTCGGAAAAGGCGGCAGCCGCATCGGCAGCCGCAGCGAAAACATCTGAGACAAATGCAGCAACGTCAGCAAGTACAGCAGCGGCCAGCGCAACAGCCGCCTCGTCATCAGCATCGGAGGCATCCACTCACGCCGCCGCATCTGATACCAGCGCATCACTGGCGGCGCAAAGCAGTACTGCTGCCGGAGCAGCAGCCACCAGAGCAGAAGATGCCGCAAAACGGGCAGAAGATATCGCGGACGTGATTTCCCTGGAAGATGCCAGCCTGACGAAAAAAGGTATCGTTAAGTTAAGCAGCGCCACGGACAGTGACAGCGAAGCGCTGGCAGCCACGCCAAAGGCGGTCCATGCTGTCATGGACGAGGTACAGACCAAAGCGCCGCTGGACAGTCCGGCACTGACTGGTACGCCAACAGCACCAACTCCGGAAACCGCAGCTGCAGGTATTGAAATTGCCACGGCAGCGTTTGTGGCTGCGAAAGTGGCGCAGTTGGTTGGTTCTGCGCCGGAAACGCTGGACACGCTGAAAGAACTGGCTGACGCGCTGGGTAACGATCCGAACTTTGCCACCACTGTACTGAATAAACTGGCGGGCAAGCAGCCGCTGGACGATACACTGACGGCGCTGTCAGGAAAAAGCGTTGACGGTCTTATCGAATACGTTGGTTTACGGGAAACCATAAATCACGCCGCCGATGCATTACTAAAATCACAGAACGGTGGCGATATTCCGGAAAAGCCGCTGTTTGTACAAAATATCGGAGCGCTCCCTGCATCAGGTACGGCTGTTGCAGCGAACAGACTGGCATCACGCGGCGCGCTTCCGGCACTGACTGGTGCGACAAGAGGCAGCGATAGCGGCCTGATAATGGGCGAGGTCTACAACAATGGCTATCCGACGCAATACGGAAATATTTTACGTCTGACCGGAACTGGTGATGGGGAAATCCTCATTGGCTGGAGCGGGACAAACGGTGCGCCAGCGCCCGCATATATTCGCAGTCATCGAGATACCGCCGATGCTGAGTGGTCCGAATGGGCGATGCTCTACACCTCACTAAATCCGCCACCGAATTCGTATCCAGTAGGTGCGGCGATAGCATGGCCGTCTGATGCTACCCCAGCCGGTTACGCCCTGATGCAGGGGCAATCGTTTGATAAATCTGCTTACCCGTTACTGGCTATAGCGTATCCGTCCGGCATTATCCCTGACATGCGGGGCTGGACAATAAAGGGTAAGCCCATCAGTGGACGTGCTGTACTGTCGCAAGAAATGGACGGCAACAAATCGCACAGTCACAGCGCCAGAGCGCAGGATACTGACTTAGGGACAAAATCTACCTCATCCTTTGATTACGGCACGAAATCGACCAATACCACGGGCAATCATACTCACCAGTTCGGCGGTTATATCAATTCATACTGGGGAGATTCCAATCACACCTCATTTCAGCCTGGAGGTGGTGCATGGACACAGGCCGCTGGCGACCATGCACATACAGTTTATATCGGAGGACATGAGCACACCATGTATATAGGTCCACACGGACACGTCGTTATTGTGGACGCAGACGGTAATGCGGAAACCACGGTTAAAAACATTGCATTTAACTACATAGTGAGGCTGGCATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
b77c4d0ca7db69f58e1cebdfe50bdab542300924d3ea309bbd33005122612604
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5931
Evidence 0,5931
Download PDB

Literature

Title Authors Date PMID Source
Refined annotation of the phage genomes integrated into the Salmonella typhimurium LT2 genome Lingohr,E.J., Villegas,A. and Kropinski,A.M. 2011-05-19 — GenBank