Protein

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Genbank accession
QGZ18363.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAQHDMNIANQSFPSFRTDLNNALSAINTMHSGTSRPSGAAAGTMWLDVTSASSPTIKFFDGSDDISFATIDYSANTVNFLDSTVVAELVSDTTPQLGGQLDVNGNAIGDGTLELLKFVETASAVNELTVTNAATGNNPSISATGDDSNVGLDFTAKGSGYIKFNDLAYIPQQALTSSSNAVAWDVQAKPNAYHLTTENTTFSAPTNSVEGSFICLEINYDGAHTIAFNTVFEFAASTAPTFTSTDGKTDILVFRYNGSVWQEVGRTLNLSES
Physico‐chemical
properties
protein length:273 AA
molecular weight: 28852,18220 Da
isoelectric point:4,16302
aromaticity:0,09158
hydropathy:-0,11758

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC202P
[NCBI] 		2686464 No lineage information
Host Candidatus Pelagibacter sp. FZCC0015
[NCBI] 		2268451 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ18363.1 [NCBI]
Genbank nucleotide accession
MN698248.1 [NCBI]
CDS location
range 24569 -> 25390
strand +
CDS
ATGGCACAACATGACATGAATATTGCTAACCAATCTTTCCCTAGCTTTAGGACAGATTTAAATAATGCACTTTCAGCAATTAATACAATGCACTCTGGTACTTCAAGACCAAGTGGTGCGGCGGCTGGTACTATGTGGCTTGATGTTACGTCAGCTTCTAGTCCAACCATAAAATTCTTTGACGGCTCAGATGATATAAGTTTTGCAACAATAGACTATTCAGCTAACACAGTTAATTTTTTAGATTCAACAGTAGTTGCAGAATTAGTTTCAGATACAACTCCACAACTAGGTGGTCAATTAGATGTCAATGGAAATGCTATTGGAGATGGTACTTTAGAATTATTAAAATTTGTAGAAACTGCTAGTGCAGTTAATGAATTAACAGTTACAAATGCGGCAACAGGAAATAACCCTAGTATTTCTGCAACAGGAGATGATTCAAATGTTGGATTAGATTTTACTGCAAAAGGAAGTGGATATATTAAATTTAACGATCTAGCTTATATTCCACAACAAGCATTAACATCATCATCAAATGCAGTAGCTTGGGACGTTCAAGCTAAACCAAACGCATATCATTTAACAACAGAAAACACTACTTTCTCTGCACCAACCAATTCAGTTGAGGGTTCATTTATTTGTTTAGAAATAAATTATGATGGCGCACACACAATCGCATTTAATACAGTATTTGAATTTGCGGCTTCAACTGCACCAACATTTACTTCAACAGATGGAAAAACTGATATATTAGTTTTCAGATACAATGGTTCAGTTTGGCAAGAAGTAGGTAGAACATTAAATTTAAGTGAGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c8bd35635b58d35c90f4841d2fb8f551ef97a2fa41d58b3c1cb3a6ffa40c72c2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9375
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank