Protein

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Genbank accession
XHH73362.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MRIIEFTESEDQKTLTKEQVFKRLKEFTLEKINAICKEKIIKEFKSEVLGSLHAYDLTLEDQANLQALVIAGIDSVFRCAEVSNGVIGFKTYKKHTKAQLLKLSQEALKFKSDLILFYGREKERLNAVTSLEALEKFVIKEYLT
Physico‐chemical
properties
protein length:144 AA
molecular weight: 16609,16050 Da
isoelectric point:8,43738
aromaticity:0,09028
hydropathy:-0,20486

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Helicobacter phage Pt11061_1
[NCBI] 		3331670 Viruses > unclassified bacterial viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHH73362.1 [NCBI]
Genbank nucleotide accession
PQ159895.1 [NCBI]
CDS location
range 19141 -> 19575
strand +
CDS
ATGAGGATAATAGAATTTACAGAAAGCGAGGATCAAAAAACACTGACTAAAGAACAGGTTTTCAAAAGACTCAAAGAATTCACGCTAGAAAAAATTAACGCTATTTGTAAAGAAAAAATCATTAAGGAGTTTAAAAGCGAGGTTTTAGGGAGCTTGCATGCGTATGATTTGACCTTAGAAGATCAAGCGAACTTGCAGGCTTTAGTGATAGCTGGCATTGATTCGGTTTTTAGGTGCGCTGAAGTATCTAACGGCGTTATAGGTTTCAAAACCTACAAGAAACACACCAAAGCGCAATTATTAAAACTATCCCAAGAGGCTTTAAAATTCAAAAGCGATCTGATTTTGTTTTACGGACGAGAAAAAGAACGCCTGAACGCTGTAACAAGCCTTGAAGCGTTAGAAAAATTTGTAATTAAAGAATACTTGACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3f5d898ae2693d09ae524013bc021592ea2521378f9b820fe815a5163a90ee84
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8810
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Screening and in silico characterization of prophages in Helicobacter pylori clinical strains Ferreira,R., Pinto,G., Presa,E., Oleastro,M., Silva,C., Vieira,L., Sousa,C., Pires,D.P., Figueiredo,C. and Melo,L.D.R. — — GenBank