Protein

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Genbank accession
QIN98786.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,66
Protein sequence
MADVQTRPDNDIFASSAGTGELLPFGDLARGWGATLGYSEGIPPMEWFNFIGNRTDKGIHYILQQGVDVWVETETYPVGALVKVNADNMLYRCLVQNINMVPSANPTQWRPVLDLTAASAAARQIGKASGNVIQVGAFGLGGNAEVVTNANSIVNDGIYQLPASGTGGPTNGVETEILHINWDAKNASQWGRTKGKRVIAMREKVNNTWGGWSYSYGPDNKPTASELGINQDFIPMDGSDSIRGNLGTVGWLHIARTTSDLLRAANSAGVGTVEYSGNIAGGTAVQELLTSVSVAANSNVITAARWGSVPMSHIQHILTAGGATQINMAVCRPGGIADRRTVALQVDGLNSRVTTTNSFILCENGVRVYSPNNPQPIDTSAGNVRGIRLGARIAAGVSESTFYPGHVMTGWRFGNKKELRGGTYWSAPLQYYINGTWINVSNVS
Physico‐chemical
properties
protein length:444 AA
molecular weight: 47286,47000 Da
isoelectric point:7,01708
aromaticity:0,07883
hydropathy:-0,16982

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage ciri
[NCBI] 		2713290 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN98786.1 [NCBI]
Genbank nucleotide accession
MT074442.1 [NCBI]
CDS location
range 32377 -> 33711
strand -
CDS
ATGGCTGATGTACAAACAAGACCCGATAACGACATCTTCGCCAGCTCAGCGGGTACTGGTGAACTGCTGCCGTTCGGTGACCTTGCTCGAGGCTGGGGTGCAACCCTTGGATACTCGGAAGGTATTCCTCCGATGGAGTGGTTTAACTTTATTGGTAACCGTACTGACAAAGGTATCCACTACATCCTTCAGCAAGGTGTTGATGTATGGGTAGAAACTGAGACCTACCCGGTTGGCGCACTGGTTAAAGTTAACGCTGACAATATGCTGTACCGTTGTCTGGTGCAAAATATTAACATGGTGCCGTCGGCTAACCCTACACAGTGGCGTCCTGTACTTGACCTGACTGCTGCATCTGCTGCAGCACGTCAGATCGGTAAAGCCTCTGGTAACGTAATCCAGGTCGGTGCATTTGGGCTAGGTGGCAACGCTGAGGTAGTTACTAATGCTAACAGCATTGTAAACGACGGTATCTACCAGCTTCCAGCGTCAGGTACTGGCGGACCTACTAACGGCGTTGAGACTGAGATTCTGCATATCAACTGGGATGCGAAAAACGCTTCACAGTGGGGACGCACCAAGGGTAAGCGCGTAATAGCCATGCGCGAGAAGGTTAACAATACCTGGGGCGGATGGTCATACTCTTACGGGCCTGACAATAAACCTACTGCCTCTGAGCTGGGTATTAATCAGGACTTCATCCCTATGGATGGTTCTGACTCAATCCGTGGTAACTTAGGTACTGTCGGCTGGCTGCATATTGCGCGTACTACCTCCGACTTGCTACGTGCTGCTAACTCCGCCGGTGTAGGTACTGTTGAGTATTCTGGTAACATCGCAGGCGGTACTGCTGTTCAGGAGTTGTTGACTTCGGTTTCTGTTGCGGCTAACAGTAATGTTATCACTGCGGCTCGCTGGGGTTCTGTGCCTATGTCACATATCCAGCACATTCTTACGGCTGGCGGTGCTACACAGATTAACATGGCAGTGTGTCGCCCTGGCGGTATTGCCGACCGCCGTACAGTAGCTTTGCAGGTGGATGGCCTTAACAGCCGAGTAACTACCACAAATAGCTTTATTTTATGCGAGAATGGTGTTAGAGTATATTCACCTAACAACCCGCAGCCTATCGATACTTCAGCCGGTAACGTTCGGGGTATTCGACTCGGCGCTCGTATTGCTGCTGGTGTATCCGAGTCAACGTTCTACCCTGGGCATGTAATGACTGGCTGGCGCTTCGGCAATAAGAAAGAGCTGCGTGGTGGTACATACTGGTCAGCGCCGTTACAGTATTATATCAACGGCACTTGGATTAACGTAAGCAACGTATCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5cb686f9b9f16ee89e293d94e7cca7e612f3a9e8a2410ea9f16762234b52ff26
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6730
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank