Protein

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Genbank accession
XTQ13979.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MIKIIYKKDALSEEKTIEQAQTIGQWLTSKYEHMPEHVRIFHTTSNMDHAEISFANEVTPKNAYELKQLDFLPGTFIVIENPKGIELGAAAWAAIISLVVGVAVALLMPVPSITQTNQNNNQSSSANNELSNRENKTRVNGRIADNYGAGWNTPDLIAVPYKVYENNVEVEHVVGCIGRGHYKINGAYDGETNIVDIAGASVEVFRPGVDIVSGEPYFSLGTEITTPPLTVQHQTSVNGQVLRPADTQSLEGTNYLHFAYPNEILRATANNTDLTTKFVSNDRVEITNASFTFNGQTFDLNGTYSVLSVADDRMTLSNPAAVNANWLKLKELNNQQTAALSPKISSIGEKWIGPFILDNVERSRVLCNFVATNGLYTVSSGGYQAAVNVTIEVEVTPVNESGAAIGNPMLKQIILKGSAKSRQTVGATLDMVTFQGRCSVRARRLTPTPTVTTVVDEVKWQALYGAYPLQSTVYEHETVFRARTYATTGALSVKSRKINFDLQRMLPTYKNGAMTTELYPTSSFADALVSMALDDKIGRRSIDEIDLENIYRTYNDVVDYFGTPLAAEFCTTIDDTNLSFEELVTNLCDAVFCTAYRQNNKLKLYFERPTDNSVMLFNFRNIIPDSYKHDLTFGVMDDYDGLIYEYTDPTDDSRINIYLPDKGAKNPKEVKSVGVRNKWQAHFNAYRIWNKMRFQRKSITFDAAPESELLVLRDRIAVADYRNGIHQSGEVVQQEGLVLTLSHDVDFIAGKSYVIYLQMADGTVDLIPVTPGSAKNKVVLGRLPNGALKLSPDDFVNTIYTVVNDDTKGSLPYLVAKREPVDQFSNTITAINYDERYYLNDKDFIDVPVDDSPIYIRYDQLDINLARLYQMQRGDLPTTGEISFVVESGALVSSSSSYRPETRFVYKFDYNSSPPKQEFIAPAATELPAIDTGEFPPDLVVNLTIKGAVVGRGGDGGLPHLAFGAWESDPDYNFTKTRRDGFQGAPGLLNRHSKLNLIIDGGTLARGGSGGGATPSGIYTGLSYGVQGIPGGAGAPFGRVMTGQPISSDSQDWRWYFGSYFNVLKITDAEASVPGKGYRTQNDRYGSPLSGDGGNWGERGTKSTNDGTWNWKYHGTTEGQPGPGGPAIVGVAPLTTQLINGGKILQTL
Physico‐chemical
properties
protein length:1148 AA
molecular weight: 126294,17200 Da
isoelectric point:5,26644
aromaticity:0,09582
hydropathy:-0,30828

Domains

Domains [InterPro]
DC_0118
STR
1–691
DC_0118 DC_0808
NF040662
Unmapped
360–838
NF040662 IPR007932
XTQ13979.1
1 1148
Architecture
STR
RBD
STR 1-691 | RBD 706-1129 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XTQ13979.1
1 1148
Domain Start End Length (AA) Confidence
N-terminal 1 242 242 0,9232
Central domain 243 441 200 0,6812
C-terminal 442 1148 706 0,0935
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-242
Central
243-441
C-terminal
442-1148

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage LPAB65
[NCBI] 		3421155 No lineage information
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XTQ13979.1 [NCBI]
Genbank nucleotide accession
PV612228 [NCBI]
CDS location
range 21269 -> 24715
strand +
CDS
ATGATTAAGATTATTTATAAAAAAGATGCTTTGTCTGAAGAAAAGACAATTGAGCAGGCTCAAACGATTGGGCAATGGCTCACTTCAAAATATGAACATATGCCTGAGCATGTCCGTATCTTTCATACCACAAGCAATATGGATCATGCCGAAATTTCATTTGCGAACGAAGTCACACCGAAGAATGCTTATGAGTTAAAGCAGCTTGATTTCTTACCAGGTACTTTTATCGTAATTGAGAATCCTAAAGGTATTGAGCTTGGTGCAGCTGCATGGGCTGCTATTATCTCATTGGTTGTGGGGGTGGCAGTTGCATTATTAATGCCAGTACCTTCAATTACACAAACAAACCAAAATAACAACCAGTCTTCATCTGCAAATAACGAATTATCCAATCGTGAAAATAAAACTCGTGTAAATGGTCGTATTGCTGATAACTATGGAGCTGGGTGGAATACTCCCGACCTAATCGCAGTACCTTACAAGGTATATGAAAACAACGTTGAAGTTGAGCATGTAGTGGGCTGTATTGGGCGTGGACACTATAAAATCAATGGAGCTTATGACGGTGAAACCAATATTGTCGATATTGCTGGCGCATCGGTAGAAGTCTTTCGACCAGGTGTAGATATTGTTTCAGGTGAGCCATATTTCTCGCTTGGTACCGAAATTACCACGCCGCCACTAACGGTTCAGCATCAAACTTCTGTTAATGGCCAAGTTTTACGTCCTGCTGATACACAATCTTTAGAAGGTACGAACTACCTTCATTTTGCATATCCAAACGAGATTCTTCGGGCAACGGCAAACAACACAGATTTAACCACTAAGTTTGTAAGTAATGACCGCGTAGAAATCACCAATGCCTCATTCACGTTTAATGGCCAGACTTTTGATTTAAATGGTACTTATAGCGTTCTATCGGTAGCTGATGACCGTATGACGTTATCAAATCCGGCGGCCGTTAATGCTAACTGGTTAAAGCTTAAAGAGTTAAATAACCAACAAACTGCAGCTTTGTCACCAAAGATCAGTTCAATAGGTGAAAAATGGATTGGTCCATTCATTCTGGACAATGTTGAACGTAGCCGGGTGCTGTGTAATTTTGTGGCCACCAATGGACTTTATACCGTTTCTTCAGGTGGGTATCAGGCCGCTGTTAATGTCACGATTGAAGTTGAAGTAACACCGGTAAATGAATCTGGTGCAGCGATTGGTAATCCGATGCTGAAGCAGATCATTTTGAAAGGTTCGGCAAAGTCACGTCAGACCGTTGGTGCAACACTTGATATGGTCACGTTTCAGGGGCGTTGTAGTGTCCGTGCACGCCGTTTAACTCCGACTCCGACAGTCACAACAGTTGTTGATGAAGTAAAGTGGCAGGCGCTTTACGGTGCTTATCCTTTACAAAGCACAGTGTATGAACATGAAACGGTTTTTCGTGCGCGTACTTATGCAACCACTGGAGCTTTATCTGTTAAGTCCCGCAAGATCAATTTTGATCTTCAGCGAATGTTGCCGACTTATAAAAACGGGGCAATGACAACAGAGCTATATCCAACGTCTAGCTTTGCTGATGCTTTGGTATCTATGGCACTCGATGACAAGATTGGCCGCCGTTCGATCGATGAGATTGATCTTGAAAACATCTATCGGACCTATAATGATGTAGTTGATTATTTTGGTACGCCGCTAGCGGCTGAGTTCTGTACTACCATTGATGATACGAATCTATCTTTTGAAGAGCTGGTTACCAATCTTTGTGATGCGGTGTTTTGTACTGCATATCGGCAAAACAATAAGCTCAAGCTTTATTTTGAACGGCCAACTGATAACTCGGTAATGCTGTTTAACTTCAGGAATATCATTCCGGATAGTTACAAGCATGACCTGACCTTTGGCGTGATGGATGACTACGACGGACTGATCTATGAATACACGGATCCGACCGACGATAGCCGTATCAATATCTATTTACCGGATAAAGGAGCCAAAAACCCAAAAGAGGTGAAATCTGTTGGTGTACGAAACAAGTGGCAAGCGCATTTCAATGCATACCGGATTTGGAACAAGATGCGCTTCCAGCGCAAATCCATTACCTTTGATGCGGCACCAGAATCAGAATTACTGGTTTTACGTGACCGGATTGCTGTAGCGGATTATCGCAATGGTATTCATCAAAGCGGTGAGGTGGTACAGCAAGAAGGTTTAGTCCTCACCTTAAGCCATGATGTAGATTTCATTGCAGGCAAGAGCTATGTGATTTATCTGCAAATGGCGGATGGCACAGTGGACCTGATTCCTGTTACACCGGGTTCAGCCAAAAATAAGGTGGTTTTAGGGCGGTTGCCGAACGGGGCCTTAAAGCTAAGTCCTGATGATTTTGTAAATACCATCTATACAGTAGTTAATGATGATACTAAAGGTTCATTGCCTTATCTGGTTGCAAAAAGAGAACCGGTTGACCAGTTCTCTAATACTATTACAGCAATTAATTACGATGAGCGCTATTACCTCAACGATAAAGACTTTATTGACGTGCCGGTTGATGATTCTCCAATTTACATTCGATATGACCAGCTGGATATTAATCTGGCGCGTTTATATCAGATGCAAAGAGGGGATTTGCCAACGACTGGCGAAATCAGTTTTGTAGTTGAATCTGGTGCACTAGTTTCTAGTTCGAGTTCTTATCGACCGGAAACCAGATTTGTCTATAAATTCGACTACAACTCCAGTCCGCCGAAACAGGAATTTATTGCCCCTGCAGCGACTGAACTACCCGCCATTGATACTGGTGAGTTCCCACCTGATCTGGTGGTAAATCTGACTATTAAAGGTGCTGTTGTTGGGCGTGGTGGTGATGGCGGTTTACCTCATTTGGCATTTGGCGCATGGGAGTCCGATCCGGATTACAACTTTACTAAAACCCGACGTGATGGGTTTCAGGGAGCACCCGGTTTATTGAACCGGCACAGCAAACTAAACCTGATTATTGATGGCGGCACTCTAGCTCGAGGTGGATCTGGTGGTGGAGCAACACCAAGCGGTATTTACACTGGGTTGTCTTATGGTGTTCAAGGTATTCCGGGTGGAGCTGGTGCACCATTTGGACGGGTCATGACAGGCCAGCCAATTTCAAGCGACTCACAAGATTGGCGCTGGTATTTTGGAAGTTACTTCAATGTCTTAAAAATTACTGATGCCGAAGCTTCGGTACCCGGAAAAGGCTACCGAACCCAAAATGACCGTTATGGATCCCCATTATCAGGTGATGGCGGAAACTGGGGCGAACGTGGTACCAAGTCTACTAATGATGGAACATGGAACTGGAAATACCATGGCACAACTGAAGGTCAGCCGGGGCCAGGTGGACCTGCAATTGTGGGAGTTGCACCACTGACAACTCAATTGATTAATGGAGGGAAAATCTTACAAACCCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
891acc8a59bd0ba1d13ec0ca284194411ca045047009b10211a0633d4345ee66
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2775
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lpab65 Li,J. — — GenBank