Protein

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UniProt accession
A0A8S5QCW9 [UniProt]
Protein name
Pectate lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAEYFVVTANFLTMQERGGAPVPVSGRVEFTPTAHAYSSDSVFTQAARTGYVVGGVLYDSLDATTAGVRLVAPSPGVSPERFGYKVTTHLRDGEGRPAPYPCGFIHPTAGAVLNLAEQAPVPDPGSPSGWSARGPRGEAGPPGVQGERGLPGPQGDPGPPGPPGAPGQPGRDGGAFDDSKILRRIEALEAEPKQAAPAKSGYSVSVIDAPYGADPTGKADATAAIQAAVDAVYAAGGGAVRIPAGKYVVSYPFIKLKGFVQVIGDGDGTQILASDGTPITEKTGVFHTGTWNERALDPDLIHFGVSSVWIRAHRTGRNHQAAIPNLCGVLLNTDLGDSPAEPDAAPTMNNVKVWDMETGAAILGRDDQAMDVWNLKIRNTLQAGLVVGKPDGHPELVAKVAGGNGGADNQFFGLNVGGANQSQGGYAGVEVYTSQCTFVHSRVWFTHRAASWQQIYALPVASADGTDITAGAPQGENRAAQKDGSGWFIKGTKCIFTGCLAQENGGHGFLVYWGQNQLTNCRAESSSYRDTVHGSAREGDAADFYIANGGADGTIITGCISQKVGGRGTGARWAFYVETWFRGLTITGCAAKDVAGPAGSETGPVRWRSPQGDNVYIQVDTVFFTTRKAGAGLQGPKGDPGPKGADGVGVPQKLSIAGSELTLSPDGGTVTLPSTDLSSLVSRADALARRVEALEARPQGGGGGGAVMKPRKRYGLTWEARDTTNVNGNGNNALLRHFLEFDPNTGLGIVHLDFTIQAGKIPSGSLFSIPDTGPVASSLVEMQSVTPGGGGIWIEKGSRQVQTDRISTPGRYILNIVGFFEEK
Physico‐chemical
properties
protein length:823 AA
molecular weight: 85602,47780 Da
isoelectric point:5,92617
aromaticity:0,07776
hydropathy:-0,25772

Domains

Domains [InterPro]
DC_1109
ATT
1–239
DC_1109 DC_2104
IPR008160
STR
132–173
IPR008160 IPR011050 Coil
IPR011050
STR
200–600
IPR011050
IPR012334
STR
203–622
IPR012334
IPR024535
ENZ
211–277
IPR024535
A0A8S5QCW9
1 823
Architecture
ATT
STR
ATT 1-239 | STR 240-803 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5QCW9
1 823
Domain Start End Length (AA) Confidence
N-terminal 1 216 216 0,9920
Central domain 217 643 428 0,9517
C-terminal 644 823 179 0,6995
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-216
Central
217-643
C-terminal
644-823

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctw4b6
[NCBI] 		2825206 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE16621.1 [NCBI]
Genbank nucleotide accession
BK015628 [NCBI]
CDS location
range 6282 -> 8753
strand +
CDS
ATGGCTGAGTACTTTGTGGTGACAGCTAACTTTTTGACGATGCAGGAGCGGGGGGGTGCCCCGGTTCCTGTGTCTGGGCGTGTGGAGTTCACGCCGACCGCGCACGCATATAGTAGCGATTCTGTTTTTACGCAGGCGGCCCGCACCGGTTACGTGGTGGGCGGCGTTCTGTATGATTCGCTTGACGCAACCACCGCTGGTGTGCGGCTTGTCGCCCCGTCTCCTGGTGTGTCGCCGGAGCGGTTCGGGTACAAGGTTACTACGCATTTGCGTGATGGTGAGGGCCGCCCGGCCCCGTACCCGTGCGGGTTTATCCACCCTACAGCGGGTGCGGTGCTGAATCTTGCTGAGCAGGCTCCGGTACCTGATCCGGGTTCGCCGTCTGGGTGGTCTGCGCGTGGGCCGCGTGGTGAGGCGGGGCCGCCGGGTGTGCAGGGTGAGCGTGGCTTGCCTGGGCCGCAGGGAGATCCGGGGCCTCCCGGCCCGCCTGGTGCACCGGGGCAACCGGGCCGTGATGGCGGGGCGTTTGATGATTCAAAGATTCTTCGGCGCATTGAGGCTCTTGAGGCGGAGCCGAAGCAGGCGGCACCCGCTAAATCGGGTTACAGTGTGAGCGTGATTGACGCACCCTATGGTGCAGACCCTACGGGCAAGGCTGATGCTACGGCCGCGATCCAGGCGGCGGTTGATGCTGTGTATGCTGCTGGTGGGGGGGCTGTACGCATCCCAGCCGGTAAATATGTCGTCAGCTACCCGTTCATCAAGCTCAAGGGGTTTGTGCAGGTTATCGGCGATGGTGACGGCACCCAAATCCTAGCATCAGACGGCACGCCTATCACGGAGAAGACAGGGGTTTTCCATACCGGTACGTGGAATGAGCGTGCCTTAGACCCCGACCTGATTCATTTCGGTGTGTCTAGCGTGTGGATTCGCGCCCACCGGACGGGCCGTAACCACCAGGCGGCCATACCTAACCTCTGCGGCGTGCTACTAAACACTGATCTTGGGGATTCCCCTGCTGAGCCGGACGCCGCACCGACCATGAATAATGTGAAGGTCTGGGATATGGAGACGGGCGCGGCGATCCTTGGCCGCGACGACCAGGCAATGGACGTGTGGAACCTCAAGATACGCAACACGCTGCAGGCCGGGCTTGTTGTGGGTAAACCTGATGGGCACCCCGAGCTGGTGGCGAAGGTTGCGGGCGGGAACGGCGGCGCCGATAACCAGTTCTTCGGGCTGAATGTCGGCGGTGCGAATCAGTCACAGGGTGGTTACGCCGGTGTTGAGGTGTATACGTCTCAGTGCACTTTCGTTCATTCCCGTGTGTGGTTTACGCACCGCGCCGCTTCGTGGCAGCAGATATACGCCCTGCCTGTGGCTTCGGCTGATGGCACTGATATTACTGCTGGCGCGCCGCAGGGTGAGAACCGGGCCGCGCAGAAAGACGGCTCGGGATGGTTCATCAAGGGAACTAAATGTATCTTCACGGGCTGTTTGGCGCAGGAGAACGGTGGGCACGGGTTCCTTGTTTATTGGGGGCAGAATCAGCTCACGAATTGCCGCGCCGAATCTTCCTCTTACCGTGACACGGTTCACGGGTCTGCTCGTGAGGGTGACGCCGCCGATTTCTATATTGCGAACGGCGGGGCCGATGGCACTATTATCACCGGCTGCATTTCGCAGAAGGTTGGGGGGCGCGGCACCGGCGCCCGCTGGGCTTTCTATGTTGAAACCTGGTTTAGGGGCCTCACGATCACCGGGTGTGCAGCTAAGGATGTTGCAGGCCCGGCCGGGTCTGAGACTGGGCCGGTGCGGTGGCGATCCCCGCAGGGCGATAACGTCTATATCCAGGTGGATACGGTGTTTTTCACTACCCGTAAGGCTGGCGCTGGGTTGCAGGGGCCGAAAGGCGACCCTGGGCCGAAGGGCGCGGACGGGGTAGGGGTGCCGCAGAAGCTTTCTATCGCCGGGAGTGAGCTTACGCTCTCACCTGATGGGGGTACGGTAACCTTGCCTTCTACTGATTTATCTTCTCTTGTTTCTAGGGCTGATGCGCTTGCCCGCCGGGTAGAGGCCCTGGAAGCACGCCCGCAAGGCGGCGGCGGTGGCGGGGCTGTGATGAAGCCTCGTAAGCGGTACGGTCTGACGTGGGAGGCAAGGGACACGACAAACGTGAACGGCAATGGCAATAATGCACTATTGCGTCATTTCCTAGAGTTTGACCCAAATACGGGGCTAGGGATAGTGCATTTGGATTTCACAATACAGGCCGGGAAAATTCCGAGCGGATCCCTGTTCTCCATCCCTGACACGGGGCCGGTGGCATCATCTCTGGTTGAGATGCAGTCAGTAACACCAGGCGGCGGCGGCATTTGGATAGAAAAAGGTAGCCGTCAGGTACAGACTGACAGGATAAGCACCCCAGGGCGCTACATCCTGAACATTGTCGGATTTTTTGAGGAGAAATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0016829 lyase activity Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
ff7e4b765be8b20ac612fa49045803adb145b3bfe5e82a8e170b84df21775b0f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8011
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50