Protein
View in Explore- Genbank accession
- QSM01084.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Protein sequence
-
MGSFKPLVPVRSNRPLELQRGNPLRYRYTLPGNREFPVGTTALLTVANTYGQTVGAYTGVVLGKDINFTEAAAISDALRRTDSWQLFVTYPSETMPTLLEQGQVIRIEAPFPDAPPQSSEFDGVSYQYSFGTPGRLYDPAWRVLAGSPFVHDNSARSLPNAVAAGTLIDDLTLWPKVAMLWFAPLQTDAVRLTYNIVRENDGIGIAVICSNYDMTNWVGIAHKQVFGVGSWDDDQLQIVTGTGPTTYAVRVTQDYDSADLSNFTAEYNPITNTYSVYLGESHTPLLSWIDTTNVVNHGEGERYVGFAFESALLSPGVEVSDWIIADTP
- Physico‐chemical
properties -
protein length: 328 AA molecular weight: 36061,89520 Da isoelectric point: 4,56084 aromaticity: 0,11280 hydropathy: -0,13933
Domains
Domains [InterPro]
IPR055688
STR
13–106
STR
13–106
DC_1994
ATT
38–328
ATT
38–328
1
328
Architecture
STR 13-37 | ATT 38-328
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
328
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 167 | 167 | 0,7250 |
| Central domain | 168 | 317 | 151 | 0,1120 |
| C-terminal | 318 | 328 | 10 | 0,3966 |
Note: Constraints were applied during segmentation.
Fixed 46 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 46 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-167
1-167
Central
168-317
168-317
C-terminal
318-328
318-328
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Mycobacterium phage Nanosmite [NCBI] |
2813164 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
QSM01084.1
[NCBI]
Genbank nucleotide accession
MW578836
[NCBI]
CDS location
range 29780 -> 30766
strand +
strand +
CDS
ATGGGTAGCTTCAAGCCCCTCGTCCCAGTTCGCAGCAACCGACCTCTTGAGCTTCAGCGCGGCAACCCGCTGCGTTATCGGTACACATTGCCGGGTAATCGGGAGTTTCCGGTCGGAACCACGGCTCTGCTGACTGTGGCCAACACCTACGGGCAGACCGTGGGTGCCTACACGGGCGTCGTGCTCGGCAAGGACATCAACTTCACCGAGGCCGCGGCCATTTCAGATGCGCTGCGCCGCACCGATTCCTGGCAGCTCTTCGTGACGTATCCGTCGGAGACCATGCCCACTCTGCTGGAGCAGGGCCAGGTCATCCGCATCGAGGCTCCGTTCCCAGATGCGCCGCCGCAGTCGAGCGAGTTCGACGGCGTGTCCTACCAGTACTCGTTCGGCACTCCTGGTCGTCTGTACGACCCAGCGTGGCGGGTGCTTGCCGGTAGCCCGTTTGTGCATGACAACAGTGCTCGTTCGCTTCCGAACGCCGTCGCGGCCGGGACGCTGATTGATGATCTGACGCTGTGGCCGAAGGTCGCGATGCTGTGGTTCGCCCCACTGCAGACCGACGCAGTTCGACTGACGTACAACATCGTTCGCGAGAACGACGGCATCGGAATCGCTGTCATCTGCTCGAACTACGACATGACGAACTGGGTGGGCATCGCTCACAAGCAGGTCTTCGGCGTGGGTTCGTGGGATGACGACCAGCTGCAGATCGTAACCGGCACCGGGCCAACGACTTACGCGGTTCGCGTCACCCAGGACTACGACTCGGCCGACCTGTCGAACTTCACCGCCGAGTACAACCCGATCACCAACACCTACTCCGTATACCTGGGCGAGAGCCACACTCCGCTCCTGTCGTGGATCGACACCACCAATGTGGTGAACCACGGCGAGGGAGAGCGCTACGTGGGCTTCGCATTCGAGTCGGCACTCCTGTCTCCAGGCGTCGAGGTCTCCGACTGGATCATCGCCGATACCCCATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
763c6a1fd27c441ff21a6218ea3de14abde9bbbea84309355471fb143c6c823c
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50