Protein

View in Explore
Genbank accession
AXG67145.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MPIIKINRATNAVIGRVREKTDDDCIEVSDELFGRIIGDPSAFAFDPSTGQIDLVEGYDTAPPEIDPVVLAQFVAEINQNISVPELGVEISISGDLGNHLLFALACAQFAPQTIVCNTKGKISTLVVDKAAAKLIAKAFSDKSSIILQSLGVSDEPVD
Physico‐chemical
properties
protein length:158 AA
molecular weight: 16782,94380 Da
isoelectric point:4,37162
aromaticity:0,05063
hydropathy:0,21582

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage vB_DsoM_AD1
[NCBI] 		2283029 Uroviricota > Caudoviricetes > Alexandravirus >
Host Dickeya solani MK10
[NCBI] 		1224151 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Pectobacteriaceae > Dickeya > Dickeya solani

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXG67145.1 [NCBI]
Genbank nucleotide accession
MH460463.1 [NCBI]
CDS location
range 65196 -> 65672
strand -
CDS
ATGCCGATAATCAAAATCAATCGCGCCACGAACGCAGTCATTGGTCGTGTGCGCGAGAAGACAGACGACGATTGCATTGAAGTCAGTGACGAGCTATTCGGCAGAATCATTGGCGACCCATCTGCATTCGCGTTTGACCCTTCTACTGGTCAGATTGATCTTGTCGAAGGATATGATACAGCGCCTCCTGAAATCGACCCTGTGGTGCTGGCGCAGTTCGTTGCCGAAATCAACCAGAACATCTCAGTGCCAGAACTTGGCGTTGAGATTAGCATCTCTGGTGACTTAGGCAACCATCTGCTATTTGCTTTGGCTTGTGCGCAGTTTGCTCCGCAGACTATTGTGTGCAACACCAAAGGGAAAATCAGCACACTCGTTGTCGATAAGGCTGCTGCCAAACTGATCGCTAAGGCCTTCTCCGATAAAAGTTCTATTATTCTTCAATCGTTAGGAGTCTCGGATGAGCCAGTTGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
80c405f8730445d8da656fa9d49b5764f850629337179527031c86ec4d952a2e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7827
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo Bacteriophages Are Represented Within an Increasing Diversity of Environmental Viruses Infecting the Emerging Phytopathogen, Dickeya solani Day,A.W., Ahn,J. and Salmond,G.P.C. 2018 — GenBank