Protein

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Genbank accession
AGC34574.1 [GenBank]
Protein name
virion component
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAGERRLNWGSDATDAKWRSEHDTANGKFIIAEDTDGGTVLLEYDESASEFVSRGPVNMNGNAIESVSQIGSDTDRFTGFMDNADTEELQYAANNTGYSGRLTDRPLVSTQDRDITVGTDTSTIQEALNEIPLLLRHNFAVRVPDGTYDEDLLVPPVVIEDTAGLDDAGAGSDEGASQIPWIRGNTTTPTNVTVNSITVSSTQGAIAPIIEGFNPISTIPNSDENVAVAVFGAQNVSFRHLDFSGAGANIGFLIYSSTATIRGATDFGSGDLNRGVEMKHNGMLSIDTFGGKTTGTVNDYLVRNDDGSVVVIERTDATGGSGLINNVHGIAHNTKDHIYYPRPAFERAIGSGSDQTVADKTETTVKFDTTTTSRYGNWDTANYEFNPPKPGEYTVTAQVQFIGPSSGTKIQVILTGSGWSRVSTENISSGGNPTVKITDTQNLTRNDTVRVNVRHEEGSGLDINTDNQEFTFVSVQRNR
Physico‐chemical
properties
protein length:479 AA
molecular weight: 51432,36510 Da
isoelectric point:4,50934
aromaticity:0,07098
hydropathy:-0,45866

Domains

Domains [InterPro]
IPR011050
STR
110–326
IPR011050 IPR008983
IPR011050
STR
115–340
IPR011050 DC_2277
IPR008983
RBD
355–458
IPR008983
AGC34574.1
1 479
Architecture
STR
RBD
STR 110-340 | RBD 341-478 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGC34574.1
1 479
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,4036
Central domain 138 336 200 0,8695
C-terminal 337 479 142 0,9891
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-336
C-terminal
337-479

Taxonomy

  Name Taxonomy ID Lineage
Phage Haloarcula sinaiiensis tailed virus 1
[NCBI] 		1262530 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Haloarcula sinaiiensis
[NCBI] 		35742 Archaea > Euryarchaeota > Halobacteria > Halobacteriales > Halobacteriaceae > Haloarcula

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGC34574.1 [NCBI]
Genbank nucleotide accession
KC117378 [NCBI]
CDS location
range 19113 -> 20552
strand +
CDS
ATGGCTGGAGAACGCCGATTGAACTGGGGGTCAGACGCGACCGACGCGAAGTGGCGAAGCGAACACGACACGGCAAACGGGAAGTTCATCATCGCCGAGGACACTGACGGCGGGACGGTCCTGTTGGAGTACGACGAGAGTGCGAGCGAGTTCGTCAGCCGCGGGCCGGTGAATATGAACGGGAACGCGATTGAGTCCGTGTCGCAAATCGGATCGGATACTGACCGGTTTACTGGCTTCATGGACAACGCGGATACAGAGGAATTGCAGTATGCCGCTAATAATACTGGATACTCTGGGCGTCTTACTGATAGGCCATTAGTTTCAACCCAAGACCGGGATATAACGGTCGGAACCGACACCAGTACGATTCAGGAAGCCCTAAATGAAATCCCATTGCTTCTGCGTCACAATTTCGCTGTCAGGGTTCCAGACGGAACCTATGATGAGGATTTATTAGTTCCGCCGGTCGTGATTGAGGATACGGCTGGACTTGATGATGCGGGGGCTGGGTCCGACGAAGGGGCAAGCCAAATACCTTGGATTCGAGGTAACACAACAACGCCAACGAACGTTACGGTAAACAGTATTACCGTCTCAAGCACGCAGGGGGCAATCGCCCCGATAATCGAAGGTTTTAATCCGATTTCAACGATACCTAACTCCGACGAAAACGTAGCGGTAGCTGTGTTCGGCGCACAAAACGTTTCATTTCGTCACCTCGACTTTAGCGGAGCTGGGGCTAACATCGGGTTCTTGATCTATTCATCGACCGCTACGATCCGCGGCGCTACGGACTTCGGGAGTGGTGACCTGAACAGAGGCGTGGAGATGAAACACAACGGCATGCTCTCTATTGACACATTTGGTGGCAAGACAACTGGGACGGTAAACGATTATCTTGTCCGAAACGACGACGGGAGCGTTGTCGTCATTGAGCGGACAGATGCGACTGGGGGCAGTGGGCTTATAAACAACGTCCACGGAATCGCCCACAATACGAAAGACCATATCTACTACCCACGGCCAGCCTTCGAGCGCGCTATCGGGTCTGGGAGTGACCAGACCGTAGCAGACAAGACGGAAACCACTGTGAAGTTCGACACCACGACAACCAGTAGATACGGTAATTGGGACACGGCAAACTATGAGTTTAACCCCCCAAAACCCGGCGAGTACACAGTTACGGCACAGGTACAATTTATTGGCCCAAGTAGTGGCACAAAAATACAGGTCATATTAACTGGAAGCGGCTGGTCGAGAGTTTCCACAGAAAACATATCATCAGGAGGTAACCCTACTGTCAAAATAACAGACACGCAAAACCTCACAAGAAATGACACTGTGAGGGTTAATGTGAGACACGAGGAAGGGTCCGGCCTTGATATAAATACCGACAACCAAGAGTTTACATTTGTGTCGGTGCAACGGAACCGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
14c4347f241283363d82413194e4d8bacf40dc4f3b9bd69556b8d36ad4e0986f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7883
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50