Protein

View in Explore
Genbank accession
ACY75790.1 [GenBank]
Protein name
predicted protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MTDLNAKIIPLRTETPGLAPTAAQLDVGEIATNLEEGLIYSKKTDGTVVTLGGSSGGGGGATAVDDLTDVDTSTTAPVHGEALVWDSTDEEWKPGVAGFGTAAGATTITFQTGDMSTYPLHGAAGFYANQAGIEADGFTYIPSSNNADDTSLAFTPPSKFQGIQFLNGLVPNSPNHAWRVNTNGGVYYDSSAGTNLNGRSGNALDDAEDADLYISWFSQDTETRLAGYKEITDGGRTWLVVRVDFKVPYNNESGGFPCEAWFATDGSISVRYGAAVDTATFDAGVNKNLIVNGDSGDGAQIPELSPHEDVFDGLTGTGDYAVNFLVTSSAGNPGRVLSDLVNVESTAPTAGQALIWDGTDNHWEPGNPTGTIQNSTDYGLDSEAINGLTFPTFTSDVPNQVNGEWRLQDGDDAFEYCGVGTDAGSIQTEMALLQAGDTVTLRWSDGSKTDYVIDTTHALNSGPNGYWISFTTDVTVPPAVLSGELTILSTRFTNPVFTALEDGDLLRWVSASSEFRPDTLEISELENVSTAPPIPGQGLIYDLISASYIPGNPDLNGLSNVNAPSPTNGQVLSYDEPNSEWIATTSTGGGGGLGTSSVDELADVDTTTVAPTTGQALTWDGSNWTPGVAVDNLGRIALTHTTASLATNASEDVDQAGTGNGGMILSLTTDVAAWVVAYVSTAARTSDGSRLRTEDPESGSGVVAEFVTTGAETLIATPPPMYFNADGPLNELYLRVTNLDSPGAVTYDLVVSRTEP
Physico‐chemical
properties
protein length:756 AA
molecular weight: 78945,87130 Da
isoelectric point:4,05003
aromaticity:0,08069
hydropathy:-0,22302

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage PSS2
[NCBI] 		658401 No lineage information
Host Prochlorococcus marinus str. MIT 9313
[NCBI] 		74547 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACY75790.1 [NCBI]
Genbank nucleotide accession
GU071090 [NCBI]
CDS location
range 77372 -> 79642
strand +
CDS
ATGACCGACTTAAACGCCAAGATCATCCCTCTGAGAACTGAAACCCCTGGACTAGCTCCGACTGCTGCCCAGCTTGACGTGGGCGAGATTGCAACGAACCTAGAAGAGGGTCTGATCTATTCCAAGAAGACTGACGGGACAGTCGTCACCTTGGGCGGTAGCAGCGGTGGAGGTGGTGGAGCAACAGCTGTAGATGATCTGACAGATGTAGACACATCAACGACAGCTCCGGTTCATGGTGAGGCCCTCGTCTGGGATTCCACTGACGAGGAATGGAAGCCAGGCGTCGCAGGCTTCGGTACGGCAGCCGGTGCAACAACGATCACTTTTCAGACGGGCGACATGTCCACCTACCCCTTGCATGGGGCGGCAGGTTTCTACGCCAACCAAGCGGGCATAGAAGCCGATGGGTTCACCTATATCCCTAGCTCGAATAATGCCGATGACACATCTCTAGCGTTCACCCCTCCCAGTAAGTTCCAAGGGATCCAATTCCTTAATGGACTTGTTCCAAACAGTCCTAACCATGCTTGGAGGGTCAACACCAATGGTGGTGTTTATTACGACAGCAGCGCCGGCACCAACCTCAACGGCAGAAGCGGTAATGCGCTAGACGATGCCGAAGATGCCGATCTATATATCTCCTGGTTTAGTCAAGACACTGAGACCAGGCTGGCCGGCTACAAAGAGATCACCGATGGTGGCAGGACCTGGCTAGTTGTTCGCGTTGACTTCAAGGTTCCCTATAACAATGAGTCTGGCGGCTTTCCATGTGAAGCCTGGTTTGCAACCGATGGGTCCATCTCTGTTCGCTATGGGGCAGCAGTTGACACCGCCACCTTTGACGCTGGTGTCAATAAGAACCTCATCGTTAACGGAGACAGTGGCGATGGTGCACAAATTCCCGAGCTAAGTCCTCATGAAGACGTCTTCGATGGACTCACCGGCACTGGCGACTACGCAGTCAACTTCCTGGTCACCTCGTCTGCAGGGAATCCGGGGAGAGTTCTAAGTGACCTAGTCAACGTAGAGAGCACAGCACCAACAGCTGGCCAAGCCCTTATCTGGGATGGAACCGACAACCATTGGGAGCCAGGCAACCCAACAGGAACGATCCAAAACTCTACTGATTATGGCCTTGATTCTGAGGCTATTAATGGCCTGACTTTCCCAACTTTCACCTCTGATGTTCCCAACCAGGTGAACGGTGAGTGGAGGCTCCAAGACGGCGACGACGCTTTTGAGTATTGCGGCGTTGGCACCGATGCTGGCTCAATCCAGACAGAGATGGCGCTGCTACAAGCTGGCGACACGGTTACTCTGCGCTGGAGCGATGGCAGTAAGACCGACTATGTGATCGACACGACGCACGCCCTCAACTCTGGACCGAATGGCTACTGGATCTCATTTACTACAGACGTCACAGTTCCACCGGCTGTCCTGTCAGGCGAGCTGACTATCCTGAGCACTCGGTTCACTAACCCGGTATTTACGGCGCTAGAAGATGGCGACCTCCTGAGATGGGTTAGTGCCTCGAGTGAATTCCGACCTGACACTCTTGAGATCAGCGAACTGGAAAACGTCAGCACGGCGCCTCCAATACCAGGCCAAGGACTGATCTATGACCTCATATCAGCGTCCTACATACCAGGCAACCCTGATCTGAATGGTCTTTCAAATGTTAATGCTCCTAGTCCCACTAACGGTCAAGTCTTGTCCTACGACGAGCCGAACTCAGAGTGGATTGCAACGACTTCCACTGGTGGGGGTGGCGGCCTAGGAACATCATCTGTCGATGAGCTCGCTGACGTCGATACCACGACAGTCGCTCCCACCACAGGCCAAGCACTGACCTGGGATGGTTCGAACTGGACGCCTGGGGTAGCAGTGGACAACCTGGGACGAATTGCCCTCACTCATACCACAGCTTCGCTAGCTACGAATGCATCCGAGGATGTCGATCAAGCTGGCACGGGGAATGGTGGAATGATCCTCAGCCTGACCACTGATGTTGCAGCGTGGGTTGTTGCCTATGTATCGACGGCAGCGAGGACATCTGACGGCAGCCGCCTAAGGACAGAAGATCCTGAGAGTGGTTCTGGGGTTGTCGCTGAGTTCGTGACGACCGGAGCTGAGACGCTTATAGCTACGCCACCGCCTATGTACTTCAACGCCGACGGGCCACTCAATGAGCTCTACCTGAGGGTTACCAATTTGGACTCACCAGGCGCTGTGACTTACGACCTGGTGGTATCTAGAACGGAACCCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
c720bafebe22775ac4082b67df3542ff744bf7d95c3025ad827a9d86327f2ced
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6483
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage PSS2 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank