Protein

Genbank accession
YP_009795313.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,85
TF
Evidence Phold
Probability 1,00
Protein sequence
MATKIIVQQIFPTDELSVSKYPKYTIQLATSLAGITVSELYEAVEDAQTAATAAEQSAQDAANSATQSANSATQSQGFAQDSLTSANNSATSATQSQGHATNAANSATSAANSATAAEQSAQDAAAELGLALRKDQNLADLPNKPASRDNLGVTALLANKADTSYVNTQLSTKTTNGQFGWGGKAVRIPDGTNLFDYFTATRASGLYWTNPTAINRPAGFTNCILYWNVIDFTNFFGVLIAAEFPNAQGRVAQISCNQGTWENAWSTGWNSKNLSPMTTDTVQAINSLKVFIRDYASFMLQSATLGGASWIEGQDNDGSTRWILGCPTQGDNTLVLRNQKANSTISLDAQSIIFPASKGFVRNARAAPGYDNITAILDSWRGEQAMGSALDNSDSRWRTFINVRHRGGNSNRENGGSDSDQWGFVLVDDNMTNNQHNFRFVKMRAGVWGAGVDIYHTGNVTVDANGFLKAASPIVKVFSNGSSEVNEESEGLETERLSTGVYRISGCLGLNSDLAWGGIEGGIVGPKCRNGLEKLWLDYDIEEDGSIILKTYHRTHPSAMEFARNEIPGVSEGDPIDIPSDSFVSLRVQMPAREEFVYTLPTSKTLHSNVYSNT
Physico‐chemical
properties
protein length:614 AA
molecular weight: 66037,98520 Da
isoelectric point:4,94189
aromaticity:0,08469
hydropathy:-0,35489

Domains

Domains [InterPro]
G3DSA:6.20.80.10
296–354
G3DSA:6.20.80.10 IPR058008
YP_009795313.1
1 614
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage DU_PP_V
[NCBI] 		2041492 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009795313.1 [NCBI]
Genbank nucleotide accession
NC_047887.1 [NCBI]
CDS location
range 80885 -> 82729
strand -
CDS
ATGGCAACTAAAATCATAGTACAACAGATATTTCCTACAGATGAATTATCTGTTAGCAAATACCCTAAATACACAATCCAGCTGGCAACTAGTCTAGCTGGAATTACCGTTTCAGAGCTTTATGAAGCTGTAGAGGATGCACAAACTGCCGCAACTGCTGCGGAACAATCTGCCCAAGACGCTGCTAATAGTGCTACTCAGTCTGCTAACTCGGCTACACAGTCACAGGGATTTGCTCAGGACTCTCTGACTAGTGCAAATAACTCTGCAACTAGCGCAACTCAGTCTCAAGGTCATGCTACGAATGCTGCTAATAGTGCAACATCCGCTGCTAACTCTGCAACTGCTGCGGAACAATCTGCCCAAGACGCTGCTGCGGAGTTAGGGCTAGCACTGCGTAAAGACCAAAACTTAGCAGATCTACCTAACAAACCTGCTTCTAGAGATAACTTAGGTGTTACAGCTCTTCTAGCAAATAAGGCAGATACTTCTTACGTTAATACTCAGCTGTCTACCAAAACAACTAACGGTCAGTTTGGGTGGGGTGGAAAAGCGGTTAGGATCCCTGATGGAACTAACTTGTTTGACTATTTTACAGCTACAAGAGCTAGTGGTCTATACTGGACTAACCCAACAGCTATAAATAGGCCCGCCGGTTTCACTAACTGCATCCTTTACTGGAACGTTATTGACTTCACTAATTTTTTTGGAGTTCTTATAGCTGCGGAGTTCCCTAATGCACAAGGTAGGGTTGCTCAAATTAGTTGTAACCAAGGTACCTGGGAAAACGCCTGGTCTACGGGGTGGAATAGTAAAAACCTTAGCCCAATGACAACAGATACAGTACAGGCTATAAACTCACTTAAAGTATTTATTCGTGACTACGCTAGTTTCATGCTTCAGTCTGCTACGCTAGGGGGAGCTAGCTGGATTGAGGGGCAGGACAACGACGGCTCAACTCGATGGATTTTAGGTTGCCCAACTCAAGGTGACAATACGCTAGTTCTTCGTAACCAAAAAGCTAACAGCACAATATCCTTAGACGCTCAATCCATAATCTTTCCTGCATCAAAAGGTTTTGTTAGAAATGCGAGGGCTGCTCCGGGATACGATAATATTACCGCAATACTCGACAGCTGGCGCGGTGAACAAGCTATGGGCTCAGCGCTGGACAATTCCGATAGTAGATGGCGCACGTTCATAAACGTCAGACATCGTGGAGGTAACTCAAATAGGGAAAATGGGGGGAGTGACTCAGACCAGTGGGGGTTTGTTCTAGTAGATGATAATATGACTAACAACCAACATAACTTCAGATTTGTTAAGATGAGGGCCGGAGTTTGGGGGGCGGGCGTAGACATCTACCATACAGGTAACGTTACTGTGGACGCTAACGGGTTCCTAAAAGCAGCCTCACCGATCGTAAAAGTGTTTTCCAACGGGAGTTCCGAAGTAAATGAAGAGTCTGAGGGACTGGAAACAGAGAGACTAAGTACTGGGGTATACAGAATTTCTGGCTGCCTAGGATTAAATTCTGATCTAGCATGGGGGGGTATAGAGGGAGGTATAGTTGGGCCTAAATGTCGTAATGGTCTGGAAAAACTTTGGTTAGACTACGACATAGAAGAAGATGGTTCTATTATTTTAAAGACGTATCATAGAACCCATCCTAGTGCTATGGAATTCGCCAGAAATGAAATACCTGGAGTCTCAGAAGGTGATCCTATAGATATTCCTAGTGATTCATTTGTTAGCTTGAGAGTACAGATGCCAGCTAGAGAAGAGTTTGTGTATACACTTCCTACAAGTAAAACTCTACATAGCAACGTGTACAGTAATACTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
f3234304eedcba6f2ad1527ee0dc184c1fde93fb8b2ceafefa8869d53e9cc7b4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7354
Evidence 0,7354
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage (DU_PP_V) infecting Pectobacterium spp. Park,T.-H. 2017-11-22 — GenBank