Protein

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Genbank accession
XLE99379.1 [GenBank]
Protein name
tail spike protein depolymerase
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALYREGKAAMTADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTNGAVVASTDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKNFDFESLQNLANQIKADSESAESSAAEAEASKYAAKISETNSKASEVAAETARDQVQQIINDAGEQSTLVVIDKNMGQWLPSAVSIFNETTDYQSFVVRGFYAANDGGSGVWVKTGAVNPSLSGTHIITQAKIYNANGVEYQLKVNVGSDVDARSNGAVCVTGSDNSRLISDVSAESTVCFGQAVNGILYTISPTDSYSLTNDDMLAPVVAQQIYIKITGGSYRISKIGCKVRGFAQYDCAGSRLYVYAANEYKRSVTNKWLNAFEHSYEDIDEVYAAIGQKEFWGAVSVGHTKISNAQILGDHRVSRRESECSAGAAFFLINPEYVTLENIHARGFQLPLVARPANSGVINSGLITTDLPTSSSAGVKFGNFYGLYCKNVFLDWGREGLAHVMCDWCTWEGGSLCDGAAWIEGPDAKRPDYFLVVTGAGFKMSGVNLTVSHTQISNETKRPGKGVVYTNCRAHTFTNNYMEHTPNLFVISKQTADPSYSKALGLIIDGIAHQYKPISSWTYITFEEGCFGHYDDSGNWIYPDLYTENQYAYNGINFTRIGSPVHDVGAFLHGGYNFKYGTYGLYAGSAGSVDFDHLRDYKETKEFISPYGLQVNSGKLYVPMHSPAYRSNICIWYKDLTGTFDPVNFVAWQSIADLETPSVDGNLVMSRGEGCIDFGNGYKMAILSNNKWNANDGVGTYTPQQNLVITVPSGKPIVLKAIQAFTGGVPVFPTGLDYNPESGMGGVFGNYTNGYIKSPGGGLFKPGDIVYPWISVDKHSNDYKYNAILGVAGNPIPQIVVGGMTLGSKYQQTFNVMINSVDATNGRTTITVPTESLPYIAMGIPAYVESGSSTSYSGSTRVYSRVMNSDGTASNQYILDAVVGAAGDTLVINQSKISGYVVKGDVAFNNVTVSTVTASGLIKAGRITVGENTVGSIVAVPASATSPGTPGQWAVDASYLYVCVASNTWRRVAVASW
Physico‐chemical
properties
protein length:1078 AA
molecular weight: 116042,49720 Da
isoelectric point:5,27389
aromaticity:0,10668
hydropathy:-0,10881

Domains

Domains [InterPro]
DC_0313
STR
1–723
DC_0313 DC_0520
Coil
Unmapped
123–143
Coil
XLE99379.1
1 1078
Architecture
STR
RBD
STR 1-723 | RBD 761-1078
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLE99379.1
1 1078
Domain Start End Length (AA) Confidence
N-terminal 1 306 306 0,9848
Central domain 307 981 676 0,9813
C-terminal 982 1078 96 0,7823
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-306
Central
307-981
C-terminal
982-1078

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Sparks
[NCBI] 		3374131 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLE99379.1 [NCBI]
Genbank nucleotide accession
PQ358943.1 [NCBI]
CDS location
range 20912 -> 24148
strand -
CDS
ATGGCACTATACAGAGAAGGCAAAGCGGCTATGACCGCAGACGGAACAGTTACCGGGACTGGCACAAAATGGCAATCATCGCTTTCGCTGATTCGCCCTGGTGCGACGATTATGTTTTTGTCGTCACCGATTCAAATGGCCGTCGTAAACAAGGTGGTCAGTGACACAGAAATTAAAGCAATTACCACAAACGGCGCTGTCGTAGCGTCTACTGACTACGCGATCCTGTTAAGCGACTCGCTGACAGTTGATGGACTGGCGCAAGATGTTGCTGAAACTCTGCGCTACTACCAGTCACAAGAAACTGTGATTGCGGATGCAGTCGAATTCTTTAAGAATTTTGATTTCGAATCTCTGCAAAATCTTGCCAACCAAATTAAGGCAGACTCTGAATCTGCGGAGTCAAGCGCTGCGGAGGCAGAGGCATCTAAATATGCGGCGAAAATTTCAGAGACAAATTCTAAGGCTTCAGAGGTTGCCGCGGAGACTGCAAGAGACCAAGTACAGCAGATCATCAACGACGCTGGCGAACAATCAACACTGGTGGTAATTGATAAAAATATGGGGCAGTGGTTGCCTTCAGCCGTTTCAATATTCAACGAAACTACAGATTATCAATCCTTCGTGGTTCGCGGGTTTTATGCCGCAAATGATGGTGGTAGTGGTGTTTGGGTAAAAACAGGGGCTGTGAATCCGTCACTATCTGGCACTCATATCATCACACAGGCGAAGATATACAACGCCAACGGCGTAGAATATCAGCTAAAAGTGAATGTCGGAAGTGACGTTGACGCCAGAAGTAATGGCGCGGTATGTGTCACCGGCAGTGATAACTCTAGACTCATATCAGATGTGAGTGCGGAAAGCACCGTATGCTTTGGTCAGGCTGTTAACGGCATACTTTATACAATAAGCCCGACAGACTCCTACTCGCTGACTAATGATGACATGTTGGCTCCAGTAGTTGCACAGCAAATCTATATTAAAATAACCGGTGGTAGTTATCGCATTTCTAAGATTGGCTGTAAGGTACGAGGTTTTGCGCAATATGATTGTGCTGGTTCAAGGCTATACGTGTACGCGGCTAATGAATATAAGCGCTCGGTAACAAACAAGTGGTTAAATGCTTTTGAGCATTCGTATGAAGACATTGACGAAGTGTATGCGGCAATCGGTCAAAAAGAGTTTTGGGGCGCGGTATCAGTTGGGCATACAAAAATCTCCAACGCCCAAATACTTGGTGATCACAGGGTTTCTCGTCGAGAATCTGAATGCTCTGCTGGTGCTGCGTTCTTCCTGATTAACCCTGAATACGTTACCCTTGAGAACATCCATGCGCGAGGCTTCCAACTTCCATTGGTTGCACGCCCGGCAAATAGCGGAGTTATTAACTCTGGTCTGATTACAACCGACCTGCCAACATCCAGTAGTGCTGGGGTCAAATTTGGTAACTTTTATGGGTTGTATTGCAAAAACGTATTCCTTGATTGGGGTCGAGAAGGTCTTGCCCATGTAATGTGCGACTGGTGTACATGGGAGGGTGGTAGCCTGTGTGATGGTGCTGCCTGGATTGAGGGGCCAGATGCTAAGAGACCAGACTACTTCCTAGTGGTCACTGGCGCTGGGTTCAAAATGTCCGGGGTGAACTTGACAGTTAGCCACACTCAGATTTCCAATGAAACAAAGCGCCCTGGTAAGGGAGTTGTTTATACAAACTGCCGCGCTCACACGTTTACCAATAACTACATGGAACACACGCCTAATTTGTTCGTTATCAGTAAGCAGACGGCAGACCCAAGCTACTCTAAGGCACTTGGTCTGATTATTGATGGGATTGCTCACCAGTATAAGCCAATCTCTTCTTGGACATACATTACCTTTGAAGAGGGATGCTTCGGACACTATGACGATAGTGGGAACTGGATTTATCCAGATCTGTATACAGAAAACCAGTACGCATACAATGGTATTAACTTTACCCGTATTGGTTCACCTGTTCATGATGTAGGTGCATTCCTGCACGGTGGTTACAACTTTAAATATGGAACTTATGGCTTATATGCTGGCTCTGCTGGGAGTGTGGATTTTGACCACCTAAGGGATTACAAAGAGACAAAAGAGTTTATCAGTCCGTATGGGTTACAGGTAAACTCTGGAAAGTTGTATGTTCCAATGCACTCACCTGCTTACAGGTCTAATATCTGTATCTGGTACAAGGATTTAACTGGAACGTTTGACCCGGTAAACTTTGTCGCATGGCAGTCGATTGCTGACCTGGAAACTCCGTCAGTTGATGGGAACCTGGTGATGTCGCGCGGAGAAGGTTGTATTGACTTCGGTAACGGCTACAAGATGGCAATCCTGTCTAATAACAAATGGAATGCAAATGATGGTGTTGGTACATACACACCTCAGCAGAACCTTGTAATCACTGTTCCATCAGGAAAACCTATCGTACTGAAAGCAATTCAGGCGTTTACTGGTGGCGTACCTGTGTTCCCTACTGGCTTGGATTACAATCCTGAATCCGGTATGGGTGGCGTATTTGGAAACTATACCAATGGTTATATAAAATCCCCTGGTGGTGGATTATTTAAACCAGGTGATATTGTTTATCCGTGGATATCTGTCGATAAACATTCCAACGACTACAAGTACAATGCGATCCTTGGTGTAGCAGGAAACCCAATACCTCAGATTGTAGTCGGAGGCATGACGCTGGGAAGCAAGTATCAGCAGACATTTAATGTAATGATAAATTCAGTTGATGCCACGAATGGTCGGACTACTATTACAGTACCAACAGAAAGCCTTCCGTATATTGCAATGGGAATACCTGCTTACGTTGAGTCTGGATCTTCTACGTCATACAGCGGGTCTACTAGAGTATACAGTAGGGTTATGAACAGTGACGGAACCGCATCTAATCAGTATATTCTTGATGCAGTCGTAGGAGCCGCTGGTGACACATTGGTTATTAACCAATCGAAAATTTCCGGCTATGTTGTCAAGGGTGACGTTGCATTTAACAACGTTACCGTCAGCACAGTAACAGCGTCTGGACTGATAAAAGCTGGTAGGATAACGGTTGGCGAAAATACCGTTGGGTCGATTGTAGCAGTGCCAGCTTCTGCAACGTCACCTGGAACACCTGGTCAGTGGGCGGTAGATGCATCATATTTATATGTTTGCGTTGCGTCTAACACATGGCGTAGGGTTGCAGTTGCATCATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
89a1c0e40fe2b9f660482e5bb504638e4b03d6ede90fc6b3e1ee3eb8aa0cae21
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5447
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Klebsiella phage Sparks Mora,D.A., Lessor,L. and Gill,J.J. 2021-01-28 — GenBank