Protein

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Genbank accession
AGG58279.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNISDDRKKGSVISYGATSSVDIILKDGLLVDCNQDNLVIETPTHSEVISLGGGQYLQGPEGAKGDAPAHEWTDTELRFRNPDGTWGVSTDLIGVKGDKGDQGIQGPTGSIGTDGPQGPTSFVWVKYTDTVTPEPEEMFNDPTGREYVGLAYNRSVEEGNGDPLEFDYRVYSWSKIQGNDGSPGTPGTPGQEGPEGPAGIGFTWIGEFPAHPTEADIGRPLEDGDTYLNTTDQSVYTYAGGWHLMLDSGATGPIGPQGAPGGGFVYQGEFSASPPSAQINWLYKNLNNDLFYVYGRSGAWEVATSDGHYYDSAGVRRFFSVNSLSGSWGDDSTMKITATGTDTFTDLNGNTNLQCIHELSLPYGYSDNHARAGTQTEGVDL
Physico‐chemical
properties
protein length:381 AA
molecular weight: 40730,64320 Da
isoelectric point:4,25988
aromaticity:0,10236
hydropathy:-0,57927

Domains

Domains [InterPro]
DC_1431
STR
8–379
DC_1431
AGG58279.1
1 381
Architecture
STR
STR 8-379 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage henriette 12B8
[NCBI] 		573174 No lineage information
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGG58279.1 [NCBI]
Genbank nucleotide accession
HQ316582.1 [NCBI]
CDS location
range 69264 -> 70409
strand -
CDS
ATGAATATAAGTGACGACAGGAAGAAAGGCTCAGTTATCTCATATGGAGCTACTTCCAGTGTTGATATCATCTTAAAGGATGGGCTACTAGTTGACTGTAACCAAGATAATCTTGTAATTGAAACCCCCACCCACAGTGAAGTTATATCTTTAGGTGGAGGTCAATACCTGCAAGGTCCCGAAGGGGCTAAAGGTGACGCCCCTGCGCATGAGTGGACAGACACTGAATTACGTTTCCGAAACCCTGATGGTACTTGGGGCGTATCTACCGACCTTATAGGTGTTAAGGGTGACAAAGGTGATCAAGGTATTCAAGGCCCGACAGGTAGTATTGGTACTGATGGCCCACAAGGCCCTACCAGTTTTGTATGGGTTAAATATACTGACACTGTTACTCCTGAACCTGAAGAGATGTTTAATGACCCTACAGGTAGAGAGTATGTAGGTTTAGCCTATAACCGTTCAGTTGAAGAAGGTAATGGAGATCCTTTAGAGTTTGATTACCGTGTTTACTCTTGGTCTAAGATTCAAGGTAATGATGGTAGCCCGGGTACTCCCGGTACTCCCGGACAAGAAGGTCCAGAAGGTCCAGCTGGTATAGGCTTCACTTGGATAGGTGAATTTCCTGCCCATCCTACAGAAGCTGATATTGGTAGACCTCTTGAAGATGGTGATACCTATTTAAACACCACAGATCAAAGTGTGTACACGTATGCCGGTGGGTGGCACCTTATGTTAGATTCTGGTGCAACAGGCCCTATAGGCCCACAGGGAGCGCCTGGAGGTGGGTTTGTTTACCAAGGTGAGTTCTCTGCTAGCCCACCAAGTGCTCAAATTAACTGGCTATACAAGAACCTTAACAATGACCTGTTCTATGTATATGGTAGAAGCGGTGCATGGGAGGTAGCTACTTCAGACGGTCACTACTACGATTCAGCAGGGGTTAGACGTTTCTTTTCAGTGAATTCGCTATCTGGTTCATGGGGTGATGATTCAACTATGAAAATCACTGCAACAGGTACAGATACATTCACGGACTTGAACGGTAATACCAACTTGCAATGCATACACGAACTATCACTACCGTATGGGTATTCAGATAACCATGCACGCGCAGGCACACAAACAGAAGGTGTGGATTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e9c97d985f8e925d4ac5fdc68096e7641691a6afefaedd527ad4b3ab10d1aef
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6881
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Vibrio phage henriette 12B8 Henn,M.R., Polz,M., Kauffman,A.K.M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank