Protein

Genbank accession
AGF91699.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,64
TF
Evidence RBPdetect2
Probability 0,57
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAFPINPNPGDTYTDEYGTVWVYAGPINGWYRQTVIPVNDTTYIGSDGAPGGIGNNTEVVFNDNGSLASDSGLTYNKTTDALSGGAFVPTGSTVPSNGVYRPSANNVAISTNGTGRLFVDSSGNVGAGLSNQSSYYADWNQLVVGAASGSKGITIATGSSDAGTLAFADGTSLTDRYRGYIQYAHGTDSLAFATGATERLRITSDGKLGLGTSSPVAKLDVNGSIRFADSGIVGPIDLGLNDTTQSYYFGLSRLNALAARFNGMKVYNNANGASGQAASRIGFFTDISGVIASTERLTITEDGKVGIGTATPGRLLQVSNTSTSPFISILGAASNDGGLLFGDNASDGSGQIRYEHSVDAMYFVTALSERARIDSSGRLLVGTSSSNGINDDLLQVITNVGVTRYAASTGGAFLNLSKSRSATTGTNSLLSSGDALGTIQFNGADGSSWPTAALIKAEVDATPGVGDMPGRLVFSTTADGASSPTERMRIGSNGKATFTLAGGSLSIGGGTEPSIYRDSSGMSGLHFSNGNILPTDGAGTVSDNTIGWGAASYRWSVIYAATGTINTSDVNLKQDIESLNAAELSVASAIKTLIRKFRFTNAVADKGDDARIHVGVIAQEVEQAFVSAGLDPRRYGLFCEDELEDGTKRLGIRYDELLAFVIAAL
Physico‐chemical
properties
protein length:665 AA
molecular weight: 68665,80770 Da
isoelectric point:4,75671
aromaticity:0,07970
hydropathy:-0,09805

Domains

Domains [InterPro]
IPR036388
554–649
IPR036388
cd10144
568–665
cd10144
IPR030392
568–629
IPR030392
IPR030392
568–665
IPR030392
AGF91699.1
1 665
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CBP4
[NCBI] 		754059 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CB0101
[NCBI] 		232348 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGF91699.1 [NCBI]
Genbank nucleotide accession
HM559717 [NCBI]
CDS location
range 7185 -> 9182
strand -
CDS
ATGGCATTTCCAATTAACCCCAACCCAGGGGATACTTATACAGATGAATACGGAACAGTATGGGTCTATGCTGGTCCTATCAATGGGTGGTACAGACAAACTGTTATTCCTGTTAATGATACTACCTATATTGGTAGTGATGGAGCGCCTGGTGGTATTGGTAATAACACTGAGGTTGTCTTCAATGATAATGGTTCGCTAGCAAGTGATAGTGGACTTACATATAATAAAACAACAGATGCTTTGAGTGGTGGAGCATTTGTACCGACTGGTAGTACAGTACCAAGTAATGGTGTCTATAGGCCGTCTGCAAACAACGTAGCCATCTCGACTAATGGCACTGGGCGGTTGTTTGTTGACAGTAGTGGGAATGTTGGCGCCGGGCTTTCGAATCAATCAAGCTACTACGCAGACTGGAATCAACTTGTTGTCGGCGCTGCATCGGGATCTAAAGGTATCACTATTGCAACTGGCAGCTCAGATGCAGGAACCCTGGCATTTGCTGACGGAACAAGTCTTACAGATCGTTATCGCGGCTACATTCAATACGCTCACGGAACTGACTCTTTAGCTTTTGCTACTGGCGCCACCGAACGCCTCCGCATCACATCGGACGGGAAGCTGGGTCTGGGGACTAGTAGCCCTGTGGCCAAACTAGACGTTAATGGAAGTATTCGTTTTGCGGATTCAGGAATTGTAGGTCCTATAGATTTAGGGCTAAATGACACAACTCAGTCTTATTATTTTGGGCTAAGCCGCCTTAATGCTCTTGCCGCTCGCTTCAATGGCATGAAGGTATACAACAATGCCAATGGAGCAAGCGGACAGGCAGCATCAAGAATTGGATTCTTTACTGACATAAGCGGAGTTATTGCTTCAACGGAAAGGTTGACTATTACAGAAGACGGCAAAGTAGGGATTGGCACTGCGACGCCTGGCAGGTTATTACAAGTAAGCAATACATCCACCAGTCCATTTATTTCAATTCTTGGAGCTGCAAGCAACGACGGCGGTCTACTTTTTGGTGATAACGCCAGTGACGGATCTGGACAAATCAGATACGAGCACAGCGTGGATGCGATGTATTTCGTCACCGCCCTTTCCGAACGCGCCCGCATCGACAGCTCCGGCAGGTTGTTAGTTGGCACGTCTTCGAGCAATGGGATTAATGATGACCTGCTTCAGGTAATTACCAACGTTGGTGTCACTCGCTACGCAGCTTCCACTGGCGGAGCATTTCTAAATCTAAGCAAATCAAGAAGTGCCACAACAGGAACTAATAGCCTTCTTAGCAGTGGCGATGCCCTCGGGACCATTCAATTTAATGGCGCAGACGGTTCTTCTTGGCCAACCGCTGCGTTAATTAAAGCCGAAGTCGATGCCACCCCTGGCGTTGGTGACATGCCGGGCCGTTTAGTGTTCTCCACTACCGCCGACGGAGCGAGCAGCCCGACGGAGCGGATGAGGATTGGGAGTAATGGCAAAGCCACGTTTACGCTGGCAGGCGGCAGCCTCAGTATTGGTGGTGGGACTGAACCATCAATCTATCGAGATTCTTCAGGAATGTCTGGCCTGCATTTTAGCAACGGAAATATCCTACCAACTGACGGAGCTGGGACAGTTTCGGATAATACAATTGGTTGGGGAGCAGCAAGTTATAGGTGGTCCGTTATTTATGCCGCGACAGGTACAATCAACACCTCTGACGTAAATTTGAAGCAAGACATTGAAAGTCTCAATGCGGCAGAGCTTTCAGTCGCATCAGCAATTAAAACATTGATCAGAAAGTTTAGATTTACGAATGCCGTTGCCGATAAAGGTGACGATGCTCGTATTCACGTTGGCGTGATTGCCCAAGAAGTTGAGCAGGCTTTTGTAAGCGCTGGGCTTGATCCGCGCCGTTACGGATTGTTCTGCGAAGACGAGCTAGAGGATGGCACCAAGCGGCTTGGTATTCGATATGACGAACTCCTGGCGTTTGTCATTGCTGCGCTCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
a787621fb4315eef6f2de967f91867e3b39348adb5c121c9f3a976dc6079c8df
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7027
Evidence 0,7027
Download PDB

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-CBP4 Henn,M.R., Chen,F., Wang,K., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank