Protein

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Genbank accession
QYW02131.1 [GenBank]
Protein name
central tail fiber receptor binding protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MLPGDGDFSSPAIIAGSVDPVKRPGDFLVDWERGGINLNDPSQGLLVQIWKLEVVRNPDTANDYDFFVTSPSTGTLFLFTAQGVKEAALAFDQNMRPFVVYVEGTQTKMWWYDPTLPGQTTTVLGTGYRSPRCCTDEKRPWHLEVSDVQLWYVRGTQLCVRYQRERYTIEHPKKTVGSQAELISVTMATNNRLRLRLRKATLPIDDQQAMIRVNPILAEIVEDLCIRSGIPAERIDVRELYDDEVPGLKISLDEGLDKPIDWLRDMFFFDKSEYDGTIHFPKRGRNVVARIPYADLVRGEPVALKKTVVDESKLPREVTINHLDPEGGYAKNHQTAQRRSNLVKAEGKKKLDTQIVLTPDQAATVAATKLKAAWREQVSYKFATTIKWTQITTGDVIEVQDSTGDWFRMHVDERNEEGTNINWECTQDGGYYAYNGIVTGNKLRPPVSTTPGLIGETDIDILNIPVQRDQNDELGVYIAGCGVSSGWAGYTMFYSLDGVNFSEAYTVQAPSTMGETLTDLLAERGYENPGHQTVEVLVNFPLSSITEAQMFKKGNRAVIGEEVLQFQTATLLGRVDSKYRYALSGLLRGTYATATPHWPAGTRFVLMDETLVFVQLQRGYLGNDLSYKPVSLGQTLDETVQTDYLFDEGVSQTEWPVSRVEAVRVGSDVTVSWIGAARLGFDSAPYHSKWFRGYRVKFSDGHTIDTLQLTATYTGAPSGVTVQVCGLNEITGEGPYSPALAT
Physico‐chemical
properties
protein length:742 AA
molecular weight: 82780,33900 Da
isoelectric point:5,14162
aromaticity:0,09569
hydropathy:-0,33518

Domains

Domains [InterPro]
DC_1657
STR
1–193
DC_1657 IPR032876 IPR056490 DC_2280
DC_2254
STR
285–511
DC_2254
QYW02131.1
1 742
Architecture
STR
ATT
STR
RBD
STR 1-193 | ATT 263-413 | STR 414-511 | RBD 512-742
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYW02131.1
1 742
Domain Start End Length (AA) Confidence
N-terminal 1 134 134 0,9412
Central domain 135 333 200 0,0389
C-terminal 334 742 408 0,0245
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-134
Central
135-333
C-terminal
334-742

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage Sonora
[NCBI] 		2859660 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYW02131.1 [NCBI]
Genbank nucleotide accession
MZ326860.1 [NCBI]
CDS location
range 22643 -> 24871
strand +
CDS
ATGCTTCCCGGTGACGGCGACTTCTCCAGCCCCGCGATTATCGCGGGGTCGGTAGACCCTGTGAAGCGCCCGGGCGACTTTTTGGTCGATTGGGAACGCGGGGGTATCAACCTCAACGATCCGTCGCAGGGTTTGTTGGTCCAAATCTGGAAACTTGAGGTCGTCCGCAATCCGGATACGGCCAACGATTACGACTTCTTCGTCACCTCTCCGTCGACGGGTACCCTCTTCCTGTTCACTGCCCAAGGGGTGAAGGAAGCGGCGCTCGCGTTCGACCAGAACATGCGTCCGTTCGTCGTCTACGTTGAAGGTACTCAGACCAAGATGTGGTGGTACGACCCGACGCTCCCGGGGCAGACCACGACCGTCCTGGGAACCGGGTACCGCTCGCCCCGATGCTGTACGGACGAAAAGCGTCCGTGGCATCTTGAGGTTTCCGACGTTCAGCTTTGGTACGTGCGCGGCACTCAGTTGTGTGTACGTTATCAGCGCGAGCGGTACACCATCGAGCATCCGAAGAAAACTGTTGGGTCTCAAGCCGAGCTGATCAGCGTCACTATGGCGACCAACAACCGTCTGCGCCTGCGCCTGCGCAAGGCTACGCTGCCTATCGACGACCAGCAGGCTATGATTCGAGTGAATCCGATCCTTGCCGAAATCGTCGAGGACCTCTGTATTCGCAGCGGAATCCCAGCGGAACGAATCGACGTCCGCGAGTTGTACGACGACGAGGTTCCTGGGCTGAAAATCAGTCTCGACGAGGGGCTCGACAAGCCGATCGACTGGCTTCGCGACATGTTCTTCTTCGACAAGTCCGAGTACGACGGGACAATTCACTTCCCTAAGCGGGGGCGCAACGTCGTCGCGCGGATTCCGTACGCCGACCTCGTTCGAGGCGAGCCCGTCGCACTGAAGAAGACGGTTGTCGACGAATCCAAGCTTCCGCGCGAGGTGACGATCAATCACCTTGACCCGGAGGGCGGCTACGCGAAGAACCACCAGACGGCCCAACGGCGCAGCAACCTCGTCAAGGCCGAAGGGAAGAAGAAGCTCGACACCCAGATCGTCCTGACTCCGGATCAAGCCGCGACTGTCGCTGCGACGAAGTTGAAGGCCGCGTGGCGTGAGCAGGTTTCTTACAAGTTCGCCACGACGATCAAGTGGACTCAAATCACCACCGGCGATGTGATCGAGGTCCAGGATTCGACTGGCGATTGGTTCCGCATGCACGTGGACGAGCGCAACGAGGAAGGGACCAACATCAACTGGGAGTGTACGCAGGACGGCGGCTACTACGCCTACAACGGTATCGTGACGGGCAACAAGCTTCGTCCGCCGGTGAGCACGACCCCGGGGCTGATCGGCGAGACCGATATCGACATCCTAAACATCCCGGTCCAGCGCGACCAGAACGACGAACTCGGCGTCTACATCGCCGGCTGCGGCGTGAGTAGCGGCTGGGCCGGCTACACGATGTTCTACTCGCTGGACGGCGTGAACTTCTCCGAAGCCTACACGGTTCAGGCCCCGTCGACGATGGGCGAGACGCTGACCGATCTACTCGCCGAGCGCGGGTACGAGAACCCCGGGCATCAAACCGTCGAGGTGCTCGTCAACTTCCCGCTGAGTTCGATCACCGAAGCCCAGATGTTCAAGAAGGGCAATCGCGCGGTCATCGGGGAAGAGGTCCTTCAGTTCCAGACTGCGACCCTGCTTGGGCGGGTCGACTCGAAGTACCGCTATGCCCTTTCGGGCCTCCTGCGCGGCACGTACGCGACCGCTACGCCGCACTGGCCGGCCGGTACCCGGTTCGTCCTCATGGACGAGACCCTCGTCTTCGTCCAGCTCCAGCGCGGCTACCTCGGAAACGACCTCAGCTACAAGCCTGTCTCCTTGGGCCAGACGTTGGACGAAACGGTCCAGACGGACTACCTCTTCGACGAAGGCGTCAGTCAAACCGAATGGCCCGTCTCGCGGGTCGAGGCCGTGCGGGTCGGTAGTGACGTGACGGTCTCGTGGATCGGCGCCGCGCGGCTCGGCTTTGACAGCGCCCCTTACCACTCCAAGTGGTTCCGCGGCTACCGGGTCAAATTCAGCGACGGCCACACCATCGATACGCTCCAGCTGACGGCCACCTATACCGGCGCGCCCAGCGGCGTTACCGTACAGGTCTGTGGGTTGAATGAGATCACCGGCGAAGGCCCCTATTCACCTGCTTTGGCGACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
892c89590335c97e6b1c7ff0c3cbd717b73aae98d084e10c4abf96ee1327c91e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7991
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Stenotrophomonas maltophilia phage Sonora Teve,M., Clark,J., Burrowes,B., Liu,M. and Gill,J. 2022-04-21 — GenBank