Protein

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Genbank accession
ASU03366.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TSP
Evidence RBPdetect2
Probability 0,88
Protein sequence
MAKQSVFYFIAPAVEDKESALYRMAATTDIRISRSARATRSRVESGKSLTDNYHLDNWDISFDGVITNVGIYKEGNTFLETSDWISQVNNLREETPIRPLTVVADNIVIENCIITNFTASKSKAEGLGGWRVSLSFQDITFVSKASLVLVQSPSEETKDDVADKTTGNNQTTKGMTEIDKNAVITSQIAVGNAAVSSVDLVTPSEG
Physico‐chemical
properties
protein length:206 AA
molecular weight: 22448,79320 Da
isoelectric point:4,81048
aromaticity:0,06796
hydropathy:-0,23058

Domains

Domains [InterPro]
DC_0628
STR
6–205
DC_0628
IPR048494
ATT
25–147
IPR048494
ASU03366.1
1 206
Architecture
STR
ATT
STR
STR 6-24 | ATT 25-147 | STR 148-205 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ASU03366.1
1 206
Domain Start End Length (AA) Confidence
N-terminal 1 204 204 0,8987
Central domain 205 204 1 0,1149
C-terminal 205 206 1 0,8031
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-204
Central
205-204
C-terminal
205-206

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage J2-1
[NCBI] 		2023998 Uroviricota > Caudoviricetes > Qingdaovirus >
Host Pseudoalteromonas sp.
[NCBI] 		53249 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASU03366.1 [NCBI]
Genbank nucleotide accession
MF370964 [NCBI]
CDS location
range 100039 -> 100659
strand -
CDS
ATGGCAAAGCAGAGCGTATTTTACTTTATAGCTCCAGCGGTAGAAGACAAGGAATCTGCTTTGTACCGCATGGCAGCTACCACAGATATAAGAATATCCCGTTCAGCGAGAGCAACCAGATCTAGGGTAGAATCTGGTAAAAGTCTAACAGATAATTACCACTTAGATAACTGGGATATTTCTTTTGATGGTGTTATTACTAATGTAGGTATTTACAAGGAAGGTAATACCTTTTTAGAAACTTCCGATTGGATTAGCCAAGTTAATAATCTCAGAGAAGAAACCCCTATTCGACCTCTGACAGTGGTAGCTGATAATATTGTTATTGAGAATTGTATTATTACCAATTTCACAGCAAGTAAAAGTAAGGCAGAAGGTTTGGGAGGGTGGAGAGTTTCTCTATCTTTCCAAGATATTACTTTTGTTTCAAAAGCTTCTTTGGTACTGGTACAATCTCCCTCAGAAGAAACCAAGGATGACGTGGCTGACAAAACAACGGGGAATAACCAAACCACAAAAGGTATGACTGAGATAGACAAAAATGCAGTTATAACAAGTCAAATAGCAGTTGGTAATGCTGCTGTCAGTTCCGTAGATCTAGTTACACCAAGTGAGGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5c2f97260efc2104d4aa79da8fecc98ede93d5b3a6381ec3c69ae80d5ebcdc67
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7635
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A Novel Lytic Pseudoalteromonas phage Isolated from Qingdao coast of China Li,H. 2018-06 — GenBank