Protein

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Genbank accession
QAY01968.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MARQTLTDLINAINAVIIENTTGAITATQLNQLLQTLTNNLYLPTVDTITVDGTGGVSELVFDGGSIVSIVDGVATITTQDFATQYRALRSFAGIAIPAGTNPVFNVVSEGTAGAPYNIMHLNIATEGGEIRGNAFVANTDGTLTANRDMFGISVCLNAVATFPGTDNVVVGIGIGDPTAIPTTPGTQVGENYVSRFRCAREGSGSGDEVTWDLNVQPVGKSTTMVEIYGVKLGDKIFPVIWTQEADDSSVTFNELIFTIEEISV
Physico‐chemical
properties
protein length:265 AA
molecular weight: 27843,90780 Da
isoelectric point:4,11687
aromaticity:0,06792
hydropathy:0,19660

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VpaJT_1
[NCBI] 		2484247 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAY01968.1 [NCBI]
Genbank nucleotide accession
MH925092.1 [NCBI]
CDS location
range 25871 -> 26668
strand +
CDS
ATGGCTCGACAAACTCTTACCGACTTAATCAATGCGATAAACGCTGTCATCATTGAGAACACGACAGGTGCTATCACAGCTACTCAGCTCAATCAGTTACTTCAAACCCTTACGAACAACCTTTACCTACCGACCGTCGATACCATCACAGTAGACGGGACGGGCGGAGTGTCCGAACTGGTTTTCGACGGCGGCTCGATCGTGTCTATCGTAGACGGTGTCGCGACTATTACGACTCAAGATTTTGCAACTCAGTACCGCGCATTGCGCTCGTTTGCGGGAATCGCTATACCCGCAGGAACTAACCCCGTGTTCAACGTCGTCTCAGAAGGTACAGCCGGAGCGCCGTATAATATCATGCATTTAAACATAGCTACCGAGGGTGGCGAGATACGAGGCAATGCTTTCGTAGCTAATACCGACGGCACGCTTACCGCAAACCGAGACATGTTCGGTATCAGTGTATGCCTTAACGCCGTGGCGACTTTCCCCGGTACGGATAACGTCGTAGTTGGTATCGGAATAGGAGACCCGACCGCAATCCCTACCACTCCTGGTACTCAAGTCGGCGAGAATTATGTATCTCGTTTCCGCTGCGCGCGAGAGGGTTCCGGTAGTGGCGACGAGGTGACTTGGGACTTGAACGTCCAACCCGTCGGTAAATCGACTACGATGGTGGAGATATACGGTGTGAAGCTCGGGGATAAAATATTCCCTGTGATTTGGACTCAAGAAGCGGACGACTCTAGCGTAACCTTTAATGAGTTGATATTTACCATTGAAGAAATAAGCGTGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
1068368fc9cf80c1b719df1f0bc8ad322e3f4dc8bd87355b3eb0f2ed43cb412d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5659
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genomic analysis of VpaJT_1 Chen,L. 2024-12-16 — GenBank