Protein

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Genbank accession
ABI33179.1 [GenBank]
Protein name
PfWMP4_35
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTQQQATEIQGPFTREFSGLDISNSVGAIPVSGSPVFHNCDVSDDGAVVRRRGTALVNTYNINNASGRAWSDTIRTKLGSEYFILSNDVGLLISLMRDDEAVGMPKEVAVVSKSSIWTVPPSSMCFIPVSAPYDRLLILTPEHPIVQLSFLERTLSFTCTTNHGGGVFSFTAPISVNDTTLWRDTNASSYIVTDAAGTVYAMTQKNPDFSFRLSGSFVVGQTYTLTIRQITWQWWAESMYYEGQDMMQNTSRFNVTSIDQNVKIPDRLITDIDPVYKNSQGLGLFVFWSSRFDSNGWAGPTTSPNTADEYGFSGGGRFTPPSLVPGATLQAAPFFITFGGIYSGTPTPINQVNILRLRELRFNGGTGAKPDDLQVYNDTVEHTWNNVPFSPSNFQTWATTYTATDRVITLMSAVGDRFNNANYFAILGATNNLPANAPLHISCLSASSYLGGSRRVWYRNLPTTGGTLDGCYVRAYGIGKYVDYSKRSFHAIGTIYRDRLILVNPSTATDQLLISEIGDATVPGEFYQFMQITDMLQGVTTDPFTLNVTSEGRERITAVTGWQKRLFVFTGSNTYSIEGGEQFGESSYAVNLVSTYGAFNQNCVVVTNLTVLYMNKFGLFDLMNKPNTDSYGAFERSVKIRGLFQNLAGSSGDNLHWLRYNESSNKLYIGLAAEGDTRTTSRNLMLNFTWDSWSTLSSAAPFQMYPAVQLFKYMTWLTNINAPLTVAMLATEMPFYIDFATIRTHIYPFTFCAGQRDVSVMSDSRGIYNLPLPVTPGILDYTITASSKAGAKTYQRNTASAGTETLTLRNPMMDYADTLELLGGNVNASQFAMVMSNGFEPYTTYPTVTYNGVAPLQWTVTGGSGLNNRPILSQNNNCIMGMIYPSVYASPIFDLESLGRLKRLKKLHLQMDTTVTSQLKYNLTSGFSQVSVLNTAWVAVVSNYNENIVPAVVSYQVGNSYEIRRVVELSIPLQGYGCDYQFYIASVGAEAFKLAAYEFDIQPQRDKRYVRR
Physico‐chemical
properties
protein length:1012 AA
molecular weight: 112038,97620 Da
isoelectric point:5,85722
aromaticity:0,11957
hydropathy:-0,13735

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ABI33179.1
1 1012
Domain Start End Length (AA) Confidence
N-terminal 1 157 157 0,9131
Central domain 158 488 332 0,8742
C-terminal 489 1012 523 0,2248
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-157
Central
158-488
C-terminal
489-1012

Taxonomy

  Name Taxonomy ID Lineage
Phage Phormidium phage Pf-WMP4
[NCBI] 		2913979 Uroviricota > Caudoviricetes > Saffermanviridae > Wumpquatrovirus WMP4 >
Host Phormidium
[NCBI] 		1198 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABI33179.1 [NCBI]
Genbank nucleotide accession
DQ875742 [NCBI]
CDS location
range 28685 -> 31723
strand -
CDS
ATGACACAGCAGCAAGCTACTGAGATTCAAGGTCCATTCACTCGTGAGTTTAGCGGGTTAGACATCTCTAACTCGGTGGGGGCGATACCAGTAAGCGGCTCTCCTGTATTCCACAACTGTGATGTCAGTGATGACGGGGCAGTAGTGAGACGGAGAGGTACAGCCTTAGTCAACACCTACAACATCAATAACGCCTCTGGTCGGGCGTGGTCAGACACCATCCGCACCAAGTTGGGCAGCGAGTATTTCATTCTGTCTAACGACGTGGGGTTGCTAATCTCCCTCATGCGTGACGACGAGGCAGTGGGTATGCCGAAAGAGGTTGCAGTCGTGAGCAAAAGCTCCATCTGGACTGTGCCCCCGTCAAGCATGTGCTTCATACCTGTAAGCGCACCATACGACCGACTACTGATACTCACGCCTGAACATCCGATTGTTCAGCTTTCGTTCTTAGAGCGTACGCTAAGCTTCACTTGCACCACTAATCATGGTGGTGGGGTTTTTAGCTTTACTGCCCCCATCTCTGTAAACGACACCACGCTTTGGCGTGACACCAACGCGTCAAGTTATATTGTGACTGACGCGGCTGGTACAGTCTATGCCATGACCCAGAAGAACCCTGACTTTAGCTTCAGACTCTCTGGGTCATTCGTGGTGGGGCAGACGTACACCTTGACTATCCGCCAAATCACCTGGCAGTGGTGGGCGGAGTCAATGTACTACGAAGGTCAAGACATGATGCAGAACACCTCAAGGTTCAACGTCACGTCTATCGACCAGAACGTTAAGATACCCGACCGACTCATCACAGACATTGACCCTGTTTACAAGAACAGTCAAGGTCTTGGTCTGTTTGTGTTTTGGTCTAGCCGTTTCGACAGTAACGGTTGGGCTGGACCGACCACTAGCCCTAATACCGCTGACGAGTATGGCTTTTCGGGAGGGGGAAGGTTTACACCCCCATCACTAGTCCCAGGTGCTACCTTACAGGCGGCGCCTTTCTTCATAACGTTTGGTGGTATCTATAGCGGTACACCCACCCCCATAAACCAGGTTAACATCCTACGGCTACGTGAACTACGATTTAACGGTGGTACGGGTGCTAAGCCGGACGACCTTCAGGTGTACAACGACACGGTAGAACATACGTGGAACAACGTACCGTTCTCGCCTAGCAACTTCCAAACGTGGGCTACGACGTACACTGCAACTGACAGGGTTATTACCCTGATGTCAGCCGTAGGTGATAGGTTCAACAATGCTAACTACTTTGCTATCCTGGGGGCTACGAACAACCTCCCCGCCAACGCACCCCTCCACATCTCTTGCCTCTCAGCGTCGTCGTACCTGGGGGGTTCCCGACGAGTCTGGTACCGAAACCTACCAACTACTGGGGGTACACTGGACGGTTGTTACGTACGGGCATATGGTATCGGCAAGTACGTTGACTACTCCAAGCGTTCTTTCCACGCCATCGGCACCATCTACCGTGACCGTTTAATCCTGGTCAACCCCAGTACAGCCACAGACCAATTACTAATCAGTGAGATTGGTGACGCAACTGTACCTGGTGAGTTTTACCAGTTCATGCAGATTACCGACATGCTACAGGGTGTCACGACTGACCCCTTCACCCTCAACGTGACTAGCGAGGGGCGTGAGCGTATCACAGCTGTAACAGGCTGGCAGAAACGTCTGTTCGTGTTCACCGGCAGCAACACCTACTCAATTGAGGGGGGAGAGCAGTTTGGTGAGTCTAGCTACGCAGTCAACCTAGTCTCAACATATGGGGCTTTTAACCAGAACTGCGTGGTTGTTACTAACCTCACGGTTCTGTACATGAACAAGTTTGGGCTGTTCGACCTCATGAACAAACCCAACACTGATAGCTACGGTGCGTTTGAGCGTAGCGTGAAGATTAGGGGACTGTTCCAAAACCTTGCAGGCTCAAGCGGGGACAACCTCCACTGGTTGCGCTACAACGAGTCAAGCAACAAACTCTACATAGGGTTGGCGGCGGAGGGGGATACCCGGACGACAAGTCGTAACTTAATGTTGAACTTTACGTGGGATAGCTGGTCAACACTGTCTAGTGCTGCACCCTTCCAGATGTACCCCGCGGTTCAACTGTTCAAGTATATGACGTGGTTGACAAACATTAACGCACCGCTCACGGTTGCGATGTTAGCCACAGAGATGCCGTTCTACATTGACTTTGCCACCATCCGTACCCACATCTACCCTTTCACGTTCTGTGCAGGTCAGCGAGATGTGTCGGTAATGTCGGACAGTCGTGGGATATACAACCTCCCCCTCCCAGTAACACCTGGGATACTCGACTACACCATCACCGCTAGCTCTAAGGCAGGCGCAAAAACTTATCAGCGTAACACCGCAAGCGCCGGTACAGAGACGTTGACCTTGCGTAACCCTATGATGGACTACGCTGACACCTTGGAATTACTTGGGGGTAACGTTAACGCCAGCCAATTCGCTATGGTGATGTCTAACGGATTTGAACCATACACCACGTACCCTACGGTAACGTATAACGGTGTAGCTCCGCTCCAGTGGACTGTTACTGGTGGTTCAGGGTTGAACAACAGACCTATCCTTTCGCAGAACAACAACTGCATTATGGGTATGATTTACCCTAGTGTTTACGCCTCCCCAATCTTTGACCTTGAGTCTCTCGGTCGACTTAAACGGTTGAAGAAGCTTCACCTACAGATGGACACCACTGTGACCTCCCAGTTGAAGTACAACTTAACTTCAGGGTTTAGCCAAGTGTCCGTGCTTAACACTGCGTGGGTGGCAGTAGTCTCAAACTACAACGAGAACATCGTACCAGCAGTTGTTAGCTATCAAGTTGGCAACTCTTACGAGATTCGTCGGGTGGTAGAGCTTAGCATACCCCTCCAAGGGTACGGATGTGACTACCAGTTCTACATTGCTTCAGTGGGGGCTGAGGCTTTCAAGCTTGCAGCTTACGAGTTCGATATTCAACCACAGCGTGATAAGCGCTACGTCAGGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bb49887c82a1bfb4cca9f39815e2b689e4d6e5b03b756bc9bcdd4e06fc0206d7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4893
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Cyanophage Pf-WMP4, a T7-like phage infecting the freshwater cyanobacterium Phormidium foveolarum: Complete genome sequence and DNA translocation Xinyao,L., Miao,S., Shuanglei,K., Yin,G. and Chengcai,A. 2007 17499329 GenBank