Protein

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Genbank accession
YP_010108355.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTKLTVGTPVTSPLTPGRDDTNIWPTHLAKYGGGGLHFAPDIASRDNLSLPRRVGATVLVDSNADGERQAFKWTGVNDDGTKADGSQGTWEPTELGTQDTFSGLTFVNADGSTTSDISVLALSGLTLSGDPTNGFTLTSDTNGGINIGTLGDDSTKTKADTLEVEWPLQAYSDPDKADTAKVSLKHGLWQLAEAPNYLAYLSDEEGILAKVRVQGGKTEEDFTFNHAKSTKGKIWPDYVICPPGNYIEIKRDDKLIGLQEADDKDPNISGGMTYYIAFVVSPLGKAPVGLGFIRPYLFDEAKDDFVMDVNGHPLGTQVNYRSGQSLKPSGNPILVTGLVNEKGLDEFSMIVEDDFPEGKIVLGDMLSGPTGIMIQAITKDSKSGSALRQFQLDTGIVLRDVIKWVDQIECSLAWGIKGYYVPATWIASTKGWPMPKRVSLFNITPAKISVEDGYLSIAATTARQEDQDKYGEPTVPCDFYVSDICDADHTNMMGGKEVRFGLTCKDSLEDMIVSLVYWDGTPDEYSVVFDTRSGGTPVLKDDWHKLTATEVSQNTVGRDVTIIGKAVLPATATNYGVIAYPKTVNHRADIEIKDLFFGAETPFTGFISKRPKYPSETAIEYHEEKGVFSQDNEKYVSLRYTLNPTNGDAQGSPLPCGELVSGALDVAVDPRVNKVAGSGATGGEGALQFSNDGKFHNYYEFKRNGQTETSHSHVFIHPGEALKKPGDVATVKLFWSKVSFDGQSFSKIPASETEIIVRYGDAPQMVVLNDFSLDLQGGDRIAFRGWCSVADGAYLISNSKTRPLVNTSVYYKRLEIKKS
Physico‐chemical
properties
protein length:819 AA
molecular weight: 89026,71140 Da
isoelectric point:4,92870
aromaticity:0,09158
hydropathy:-0,33614

Domains

Domains [InterPro]
DC_0389
STR
1–819
DC_0389
YP_010108355.1
1 819
Architecture
STR
STR 1-819
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Cody
[NCBI] 		2736263 Uroviricota > Caudoviricetes > Demerecviridae > Thalassavirus > Thalassavirus cody
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010108355.1 [NCBI]
Genbank nucleotide accession
NC_055849.1 [NCBI]
CDS location
range 89178 -> 91637
strand +
CDS
ATGACAAAATTAACTGTAGGTACTCCTGTCACGTCCCCACTTACTCCGGGGCGTGACGATACCAACATTTGGCCAACCCACCTAGCTAAATATGGTGGAGGAGGCCTGCATTTTGCTCCTGATATCGCTAGCAGGGATAATTTATCTCTGCCTAGACGAGTTGGAGCAACAGTATTAGTAGACTCTAATGCTGATGGAGAACGCCAAGCATTTAAGTGGACAGGTGTCAACGATGATGGTACAAAGGCAGATGGTTCACAAGGTACATGGGAACCCACCGAGCTAGGCACACAAGATACCTTCTCTGGACTTACATTTGTTAATGCAGATGGCAGTACCACATCTGATATCAGCGTGTTAGCGCTTAGCGGGCTCACGCTAAGCGGAGACCCTACTAATGGGTTTACCTTAACTAGCGACACAAACGGAGGTATCAATATCGGCACTCTTGGTGACGACTCCACCAAGACTAAAGCAGATACGTTAGAGGTAGAGTGGCCATTACAAGCATATAGTGATCCAGATAAGGCGGATACCGCTAAGGTGTCTTTAAAGCATGGATTATGGCAATTAGCTGAAGCCCCTAACTATCTAGCATACCTAAGTGATGAGGAAGGCATCTTAGCTAAAGTTAGAGTACAGGGAGGTAAAACTGAAGAGGACTTTACATTTAATCATGCTAAGTCTACTAAAGGTAAAATCTGGCCTGATTATGTTATCTGCCCACCAGGAAACTACATCGAGATAAAACGAGATGACAAATTGATTGGGTTACAAGAGGCAGACGACAAAGACCCTAACATTAGTGGCGGCATGACTTATTATATCGCATTTGTAGTATCTCCTTTAGGTAAAGCTCCTGTTGGGTTAGGGTTTATTAGACCTTACCTATTCGACGAAGCTAAGGACGATTTCGTAATGGACGTCAACGGGCACCCTCTAGGTACTCAAGTAAACTACAGGTCTGGACAAAGTCTAAAGCCTTCTGGAAATCCGATACTGGTAACAGGTTTGGTGAACGAGAAAGGCTTGGATGAATTCTCTATGATTGTAGAGGACGACTTCCCAGAAGGTAAGATTGTACTTGGCGACATGCTGTCCGGCCCAACTGGTATTATGATACAAGCAATTACTAAAGATAGTAAGTCTGGTAGTGCCTTACGCCAGTTCCAACTAGACACAGGTATAGTGCTAAGAGATGTTATTAAGTGGGTGGATCAAATAGAGTGCTCTCTAGCTTGGGGTATAAAAGGGTATTACGTACCCGCAACTTGGATTGCCTCTACTAAAGGTTGGCCAATGCCTAAGCGAGTAAGTTTATTTAATATTACTCCTGCTAAAATTTCTGTAGAAGATGGCTATTTAAGTATCGCAGCAACTACGGCAAGACAAGAAGATCAGGACAAGTATGGGGAACCTACTGTACCTTGTGATTTCTACGTAAGCGATATTTGTGATGCTGACCATACTAACATGATGGGAGGTAAGGAAGTAAGATTTGGGCTAACCTGTAAAGATAGTCTAGAAGATATGATCGTATCTCTAGTCTACTGGGACGGTACTCCAGATGAATACTCAGTAGTGTTCGACACTAGAAGTGGCGGTACTCCTGTTCTTAAAGATGACTGGCATAAGCTTACTGCTACAGAGGTATCTCAAAATACAGTAGGTAGGGATGTTACCATAATTGGTAAGGCGGTACTTCCAGCAACTGCTACAAACTACGGTGTTATCGCATACCCTAAAACAGTAAATCACAGAGCAGATATTGAAATCAAAGACTTGTTCTTTGGGGCTGAGACTCCATTTACAGGATTTATATCAAAACGCCCTAAGTACCCTAGTGAAACGGCAATAGAGTACCATGAAGAAAAAGGTGTATTCTCCCAAGATAATGAGAAATACGTTAGCTTACGCTACACCTTAAACCCAACCAATGGTGACGCACAGGGTAGTCCCCTGCCTTGTGGTGAATTAGTAAGCGGAGCTCTAGATGTTGCGGTAGACCCTAGAGTAAATAAAGTTGCAGGCTCAGGAGCAACTGGCGGTGAGGGTGCGTTGCAGTTCTCAAACGATGGTAAGTTCCATAACTACTATGAGTTTAAGAGAAATGGCCAAACAGAGACATCCCATAGTCATGTATTCATACATCCTGGGGAAGCACTAAAAAAACCAGGCGACGTAGCTACCGTAAAACTATTCTGGTCTAAGGTATCTTTTGATGGACAATCCTTCTCTAAAATTCCAGCTTCGGAAACAGAGATTATTGTGAGGTATGGGGATGCTCCGCAGATGGTAGTACTAAATGACTTCTCACTAGATCTACAGGGTGGGGATAGAATAGCATTCAGAGGATGGTGTAGTGTCGCTGATGGTGCTTACTTAATCTCTAATAGTAAAACCAGACCACTAGTAAACACCTCTGTTTACTACAAACGTCTAGAGATCAAAAAATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
23e741443429bb2664f7be99a59a2650ec6b6bbc2482788354da5d08aa574e6d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7778
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50