Protein

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UniProt accession
A0A7D7IL31 [UniProt]
Protein name
Rhamnogalacturonase A/B/Epimerase-like pectate lyase domain-containing protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNILRSFTETVVTTPTELFPISFEYDEKYDAVHVFLNDVAVEDLGYTVSQVNAVTLKIEPAIPDGTVRIERETDIDKMKYIFDAGALFIDQNVDADFRQIVHSQQEVRDGFIKLRGDVLPLVHGLQEALQQAQEASEAAQEAAAAAEEAAQQTRMAEKVIDKSGLTQQQINDAWLTVENFGAKGDGVTDDSAAFQAYCDSPFTGANIRLANRRAVYIIKKQVDCKGKGIVGNGFGKQSQAAYDLSSIRVMEGDYTNSNADLADIAFINVGAEVRNLQFVSSKLGTISGINVSGYNTTINNVNFTGFKNQVHVIGASVRFSVSDLTSIGAANAGFYFRDKQSDQSTTAYFNQCSWQWGNKAVVFEKEAYGCVFRDNIVEYMDGGFEASVFSNCIFEGNWCESTRSGNAIDWIVNTSYQQLFNCKFGVNYIRAPWIDRTNPNDIAGSNNAGGIQAKNSAVAVTGATGAKIRLNTNGLSTGFADWFGVSNSPLSSRALLLTTQDRASGSNYDTPIVIAAPNGCLWERNRSATDYTPVTKRRLIGANADNTAAYYGVDTYTKRVRKWSTFEHTTNTPGQFLAPTMLTYDSAATTQQVNAGWSITKEAGTTGIYILQRTASTVAPMANPNFVVGGIFTGSVTGTLAAVSYSLQAIETYSGSWTAYKEAAGFKIAFRDRAGALVNVNRFTAMFTVVSGF
Physico‐chemical
properties
protein length:693 AA
molecular weight: 75371,09800 Da
isoelectric point:5,16748
aromaticity:0,10678
hydropathy:-0,18644

Domains

Domains [InterPro]
DC_1263
ATT
1–362
DC_1263
Coil
Unmapped
122–152
Coil IPR011050
IPR012334
STR
140–492
IPR012334
IPR024535
ENZ
175–377
IPR024535
DC_0160
STR
293–693
DC_0160
A0A7D7IL31
1 693
Architecture
ATT
STR
ATT 1-362 | STR 363-693
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A7D7IL31
1 693
Domain Start End Length (AA) Confidence
N-terminal 1 191 191 0,9943
Central domain 192 479 289 0,9863
C-terminal 480 693 213 0,9801
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-191
Central
192-479
C-terminal
480-693

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage Ab124
[NCBI] 		2749428 Uroviricota > Caudoviricetes > Autographivirales > Beijerinckvirinae > Friunavirus
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0098994 symbiont entry into host cell via disruption of host cell envelope Biological Process IEA:UniProtKB-KW (UniProt)
GO:0098996 symbiont entry into host cell via disruption of host cell glycocalyx Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
f3b2fd7652b00cd99154181be944b4cd2e203414bb621102929eed523e2d0a8f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6459
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50