Protein

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Genbank accession
AAG00437.1 [GenBank]
Protein name
P5
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MARAPAVSATRALQEWLQAQGVETVIVNGVARKLVVDGKMGNITSTAAKQDESPITKMIFDEIVRLSPVAPRARVSFPSTSNDPDRSVMEQLVRDECAARNVAFERVTQLIDHESGWNHASAISPTGAVGLMQLTSWPIRQWNVDHAVGKQYEQDERYDLRSNIVVGVWYVRRCAEFIGEDPSSTDPMVWARIYGAYNLGPGTMKLLLAGDYQNSNVQSSWRVQSNALKAGGIERYVSNAKSLFA
Physico‐chemical
properties
protein length:245 AA
molecular weight: 27085,30150 Da
isoelectric point:6,84332
aromaticity:0,07755
hydropathy:-0,28204

Domains

Domains [InterPro]
G3DSA:1.10.530.10
RBD
88–244
G3DSA:1.10.530.10
G3DSA:1.10.530.10
RBD
90–244
G3DSA:1.10.530.10
IPR023346
STR
91–210
IPR023346
IPR008258
ENZ
98–205
IPR008258
cd00254
ENZ
107–205
cd00254
AAG00437.1
1 245
Architecture
STR
RBD
STR 88-210 | RBD 211-244 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phi13
[NCBI] 		134554 Viruses > Riboviria > Orthornavirae > Duplornaviricota > Vidaverviricetes
Host Pseudomonas syringae
[NCBI] 		317 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAG00437.1 [NCBI]
Genbank nucleotide accession
AF261666 [NCBI]
CDS location
range 1542 -> 2279
strand +
CDS
ATGGCGCGCGCACCCGCTGTGAGCGCCACCCGTGCTTTGCAAGAGTGGTTGCAAGCGCAGGGTGTGGAAACGGTTATCGTCAATGGCGTCGCGCGAAAGCTCGTCGTCGACGGTAAGATGGGTAACATCACCTCGACCGCTGCGAAGCAGGACGAGAGCCCCATCACCAAGATGATCTTCGATGAGATCGTCCGGCTTTCGCCGGTGGCCCCACGCGCACGCGTGAGCTTCCCGTCGACGTCGAACGATCCCGATCGCTCGGTGATGGAACAACTGGTTCGTGATGAGTGCGCTGCTCGGAACGTCGCTTTCGAGCGCGTGACACAGCTCATCGATCATGAGTCCGGTTGGAATCACGCATCTGCTATTTCTCCAACTGGGGCGGTGGGCTTGATGCAGTTAACTTCCTGGCCGATTCGACAATGGAATGTCGACCACGCAGTGGGCAAGCAGTACGAACAGGATGAGCGCTATGACTTGCGTTCCAACATCGTTGTCGGTGTCTGGTACGTCCGTCGCTGTGCTGAGTTCATTGGTGAGGATCCGTCAAGCACTGATCCGATGGTTTGGGCCCGTATCTACGGTGCCTATAATCTGGGCCCTGGGACGATGAAACTGTTGCTGGCTGGTGATTACCAGAATAGCAACGTCCAATCCTCCTGGCGTGTGCAGTCAAACGCACTCAAGGCGGGAGGCATCGAACGTTACGTAAGTAACGCCAAATCCTTGTTCGCTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
49e85524e1d1b93c524a798562cb40c1617e620122f7684aa04ce1307bc8dddc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7951
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of additional bacteriophages with genomes of segmented double-stranded RNA Mindich,L., Qiao,X., Qiao,J., Onodera,S., Romantschuk,M. and Hoogstraten,D. 1999 10419946 GenBank
Characterization of phi 13, a bacteriophage related to phi 6 and containing three dsRNA genomic segments Qiao,X., Qiao,J., Onodera,S. and Mindich,L. 2000 11017801 GenBank