Protein

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UniProt accession
A4PE46 [UniProt]
Protein name
Phage tail collar protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MGDLNALVAPGEYYYTSDNANAPSGHGVLKVWRESATMVFQLVHSSDNEVFTRYRASSGTWTAWRQLVGQAGLIGYFARSTAPSGWLKANGAAVSRTTYAALYAEIGTTFGAGDGAATFNLPDLRGEFLRGWDDGRGVDSGRGIGTWQSGSPVVHDDVGGIASFNITALGDGTNVAWSNIADPWVGAFPLTMYDSSAATFVDANNKGFINMARPRNVAFLPCIKY
Physico‐chemical
properties
protein length:225 AA
molecular weight: 23980,34370 Da
isoelectric point:5,53733
aromaticity:0,12444
hydropathy:-0,11111

Domains

Domains [InterPro]
cd19958
STR
3–67
cd19958 IPR037053
DC_1413
STR
4–225
DC_1413
SSF88874
STR
71–225
SSF88874
IPR011083
ATT
72–129
IPR011083
A4PE46
1 225
Architecture
STR
ATT
STR
STR 3-67 | ATT 68-129 | STR 130-225
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RSA1
[NCBI] 		2993856 Uroviricota > Caudoviricetes > Peduoviridae > Aresaunavirus RSA1 >
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAF52401.1 [NCBI]
Genbank nucleotide accession
AB276040 [NCBI]
CDS location
range 16871 -> 17548
strand +
CDS
GTGGGCGACCTGAATGCCCTGGTGGCGCCGGGGGAGTACTACTACACCAGCGACAACGCCAACGCGCCGAGCGGTCACGGCGTGCTCAAGGTGTGGCGGGAGAGTGCGACGATGGTTTTCCAGCTCGTCCACTCGTCGGACAACGAAGTGTTCACGCGCTACCGCGCCAGCAGCGGTACGTGGACCGCCTGGCGGCAGCTGGTGGGCCAGGCGGGGCTGATCGGGTATTTCGCGCGCTCCACCGCCCCGAGCGGATGGCTCAAGGCCAACGGCGCGGCGGTCAGTCGTACGACCTACGCGGCGCTGTATGCCGAGATTGGCACCACGTTCGGCGCGGGCGACGGCGCCGCCACGTTCAACCTCCCGGACCTGCGCGGCGAATTCCTGCGCGGCTGGGATGACGGGCGCGGCGTGGATAGCGGCCGCGGAATCGGCACGTGGCAGTCCGGCTCCCCGGTCGTGCATGACGACGTGGGCGGCATCGCCAGTTTCAACATCACGGCGCTGGGCGACGGCACCAACGTGGCCTGGTCGAACATCGCCGACCCTTGGGTCGGCGCCTTCCCGCTCACGATGTACGACTCCTCGGCCGCAACCTTCGTTGATGCCAACAACAAGGGGTTCATCAACATGGCCCGCCCGCGCAACGTCGCGTTCCTCCCCTGCATCAAGTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9023779de2b890fe069153c4c9c832005e6c6a12f11b1d9c3d04346a9657f84a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7908
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50