Protein

Genbank accession
APD20118.1 [GenBank]
Protein name
tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TSP
Evidence GenBank
Probability 1,00
TSP
Evidence Phold
Probability 1,00
Protein sequence
MTRNVEEIFGGVVTAPHQIPYTYTSVNGGETFLSLPFYPITGFVTINGGVQVPLDNFFIESNILHLGRSLEPDDVVFCLFDKIISPEDTSSAIRIYKMLTTGGETEFIPDFTAYGVQTLFVDGRYKVPGVDYTYDPGTGKVTMTSPLPASVWVSAEMTVKQNVSALSGNDGASKVGTSTGISVQEVLDAFKFDITENANGIQQNANDIADFKLLTGAGLIGGLSFISPEMYGAKGDGVADDTAAVQAAIEAAKTSGKYRVCGMGRYRLFGSLKLDNLGQGFYLNLQTIIADASFPATSDWKTANGMIEVGGASNGSMVGVEVRIGFAHGNNVATLFKLKGYGAGGSFFWGGRITNCVGVFDCTNSTQANSNSNFIEGLYWMNGTYGIRLRRSGSFVVEAPKIRVGFMTGLRYGGIQLFNGTQYFAINSTGMDFCGRFLTQLSVNALPPVSVRETMLTNDATSATFEVLDVYEQTQGNYSILVIEPVSSEGGSTNFSVGQTVTVGGVQYTISAVTTSVTANAYFDFIHGFQGAPFSRGYAQFDYLSRAVGGNFNGTAMFWYNSFQEVNHAINNIWFRQQGTSISIVDRWTGTSLKIETTGGKATTLPGGVVTQGTSTVGGQVYLGGQRVFGSENNVNLAQGVATNIRTLTWSTDGTVITTKKSYRVVISGPNGLSGVGGSFDLQVSPSGAEIMDASSVKGITLSVSGFTLVATQGSQPTMNVTFMFKREM
Physico‐chemical
properties
protein length:729 AA
molecular weight: 77723,44230 Da
isoelectric point:5,15435
aromaticity:0,10974
hydropathy:0,02661

Domains

Domains [InterPro]
IPR012334
215–537
IPR012334
IPR011050
224–426
IPR011050
APD20118.1
1 729
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_Sru_IME250
[NCBI] 		1852640 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD20118.1 [NCBI]
Genbank nucleotide accession
KY073123 [NCBI]
CDS location
range 77963 -> 80152
strand +
CDS
ATGACCAGAAACGTTGAAGAGATTTTCGGTGGAGTCGTCACAGCGCCCCATCAAATTCCTTACACTTACACTTCCGTAAACGGCGGGGAAACTTTCCTGTCGCTGCCTTTCTATCCTATTACAGGATTTGTGACAATTAACGGCGGCGTGCAAGTCCCTTTGGACAACTTCTTTATAGAAAGTAATATTCTTCATTTGGGTAGATCTCTGGAACCAGATGATGTCGTATTTTGCCTGTTTGATAAGATAATATCTCCGGAAGATACTTCTTCAGCAATCCGAATTTATAAGATGCTAACGACAGGTGGTGAAACCGAATTCATTCCTGATTTTACGGCGTATGGTGTCCAGACGTTATTTGTAGACGGTCGTTATAAAGTACCTGGTGTTGACTACACATACGACCCTGGAACCGGAAAGGTCACGATGACATCCCCTCTCCCCGCAAGTGTTTGGGTGTCTGCTGAAATGACAGTGAAACAGAATGTGTCTGCTTTATCAGGTAATGACGGTGCTTCCAAAGTCGGCACTTCCACGGGCATTTCCGTACAAGAAGTATTGGACGCATTTAAATTCGATATCACAGAAAATGCGAACGGTATTCAACAAAATGCTAATGACATTGCTGACTTTAAACTTCTTACAGGCGCTGGTTTAATCGGCGGTTTGAGCTTTATTTCACCTGAAATGTATGGCGCCAAAGGTGATGGTGTAGCCGATGATACTGCGGCAGTGCAAGCTGCTATCGAAGCGGCCAAAACCTCTGGAAAATATCGCGTTTGTGGTATGGGACGTTATCGATTGTTTGGATCCCTGAAACTAGACAATTTAGGACAAGGGTTCTACTTAAACCTTCAAACGATTATTGCTGATGCGTCTTTCCCTGCGACTTCAGATTGGAAGACTGCGAATGGGATGATAGAAGTTGGTGGCGCTAGTAATGGTTCGATGGTTGGCGTTGAAGTCCGTATCGGGTTTGCTCACGGAAATAACGTCGCCACTCTATTCAAGTTAAAAGGATATGGCGCTGGTGGTAGTTTCTTTTGGGGTGGTCGTATCACTAACTGTGTGGGTGTATTTGATTGTACTAACTCCACCCAAGCCAACTCTAACTCCAATTTCATCGAAGGTCTGTATTGGATGAATGGGACGTATGGTATTCGTCTCCGTCGCAGCGGTTCCTTTGTTGTTGAAGCCCCGAAAATCCGCGTAGGCTTTATGACAGGGCTTCGATATGGTGGTATCCAACTGTTTAATGGAACTCAATACTTCGCCATTAATTCTACAGGTATGGATTTCTGTGGACGGTTCCTGACACAGCTGTCTGTAAATGCTCTACCACCAGTGTCAGTTCGAGAGACGATGTTGACCAACGATGCGACGTCGGCTACGTTCGAAGTTCTGGACGTTTATGAGCAGACTCAGGGAAATTACAGCATTCTTGTTATTGAACCAGTTAGCTCGGAAGGTGGAAGCACCAACTTCTCTGTTGGACAAACTGTAACAGTCGGTGGTGTTCAATATACCATCAGTGCCGTTACAACTTCTGTCACGGCCAACGCATATTTTGACTTTATACACGGGTTCCAGGGTGCTCCATTTAGTCGCGGTTATGCGCAATTTGACTACCTTTCCCGCGCTGTGGGTGGTAACTTCAATGGGACTGCGATGTTCTGGTATAACAGCTTCCAGGAAGTCAACCACGCAATCAACAACATATGGTTCCGCCAACAAGGGACTAGCATTTCTATTGTCGATCGCTGGACGGGTACTAGTTTAAAAATCGAAACTACCGGCGGGAAGGCCACGACGCTTCCTGGTGGCGTTGTGACTCAAGGAACGTCCACTGTTGGCGGGCAAGTATATCTTGGTGGGCAACGAGTTTTTGGTAGTGAGAATAACGTAAATTTGGCACAAGGTGTGGCAACCAATATCCGTACACTTACCTGGTCAACAGATGGAACTGTAATTACCACCAAGAAATCATATCGTGTCGTTATCTCTGGACCAAATGGCCTGTCTGGCGTGGGCGGTAGTTTTGATTTGCAAGTCAGTCCTTCAGGCGCTGAAATTATGGACGCCAGTAGTGTTAAAGGGATAACCCTTTCCGTGTCTGGGTTTACCCTTGTAGCCACTCAAGGTTCTCAACCAACTATGAACGTGACATTCATGTTCAAGAGGGAAATGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
b5cc03075324861fb938f01b32bd0a7c73921f9c3004d88d11d27fdd7bfb78e8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6933
Evidence 0,6933
Download PDB

Literature

Title Authors Date PMID Source
Complete genome of the first virulent bacteriophage infecting the opportunist pathogen Serratia rubidaea Xing,S., Ma,T., Zhang,X., Huang,Y., Mi,Z., Sun,Q., An,X., Fan,H., Wu,S., Lin,W. and Tong,Y. 2017-03-06 — GenBank